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ERMZT820_2_curated_scaffold_454

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT820_2_curated_scaffold_454_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..156
-----------------
DNA (156bp)
protein (52aa)
elongation factor Tu n=1 Tax=Methylotenera mobilis RepID=UPI00037BB8D6
translation elongation factor Tu
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT820_2_curated_scaffold_454_trna_1
unknown

Not on your lists

288..360
-----------------
DNA (73bp)
transferRNA Trp
ERMZT820_2_curated_scaffold_454_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

402..746
-----------------
DNA (345bp)
protein (115aa)
Protein translocase subunit SecE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHT0_9PROT
secE; preprotein translocase subunit SecE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

746..1282
-----------------
DNA (537bp)
protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH2_9PROT
nusG; transcription antitermination protein NusG
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1369..1800
-----------------
DNA (432bp)
protein (144aa)
50S ribosomal protein L11 n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0AAG9_BURTH
rplK; ribosomal protein L11
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1801..2490
-----------------
DNA (690bp)
protein (230aa)
50S ribosomal protein L1 id=1359004 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
50S ribosomal protein L1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2761..3285
-----------------
DNA (525bp)
protein (175aa)
50S ribosomal protein L10 n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X8S1_METSD
rplJ; 50S ribosomal protein L10
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3344..3727
-----------------
DNA (384bp)
protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RL7_NITMU
rplL; 50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3830..7909
-----------------
DNA (4080bp)
protein (1360aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFH7_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7950..12191
-----------------
DNA (4242bp)
protein (1414aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR75_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12406..12783
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S12 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP60_SIDLE
30S ribosomal protein S12
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12825..13295
-----------------
DNA (471bp)
protein (157aa)
30S ribosomal protein S7 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR69_9PROT
30S ribosomal protein S7
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13305..15422
-----------------
DNA (2118bp)
protein (706aa)
Elongation factor G n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHB0_9PROT
fusA; elongation factor G
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_454_13

Not on your lists

15435..15560
-----------------
DNA (126bp)
protein (42aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Translation elongation factor Tu (Fragment) n=2 Tax=root RepID=T1C6Q1_9ZZZZ
Translation elongation factor Tu {ECO:0000313|EMBL:EQD81081.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 14 items

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