ggKbase home page

ERMZT820_2_curated_scaffold_822_16

Organism: ERMZT820_2_Betaproteobacteria_66_22_curated

near complete RP 49 / 55 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(11546..13036)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor id=12497753 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 493.0
  • Bit_score: 594
  • Evalue 7.50e-167
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 488.0
  • Bit_score: 590
  • Evalue 3.10e-166
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 484.0
  • Bit_score: 774
  • Evalue 7.50e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
GTGCGGAACCCAAAGTCCGACACACTGCTAGCCGGCATGAAGCATTCACTCCAGCTCCGGCTGTCCCAGCATCTCACGCTCACGCCGCAGCTGCAGCAGTCGATCCGCCTGCTGCAGCTGTCGACGCTCGAGCTGAACCAGGAGCTGGACCGCATCCTGCAGGAAAATCCGCTGCTCGAGCGCGAAGAAGGCTTTCGCGAGCAGCCGGTTCCCGCCATGGACCCGGCTGCAGGCGCCGCCGACGCCGCGCCCGCTGCCGATACCGGGCCGGCGGGCGCCGCCGAAAGCGACTCGGCGCCGGCTGAGGCCGATCCCGAGCGAGCCGAGCTCGGCTCGCCGGACGACGCCCCGCCTTCGGGCTACCGCGACGACGCCGAAGACGGCGAGCACCAGCAGGTCGCCGCCGATGCCCCCACCCTGCGCGCGCACCTGCTGGGGCAGCTCTCGCTCACCAAGGTCTCCGAGCGCGACCACCGGCTGGTCGCGTTGCTGATCGATTCGCTGGACGACGACGGTTATCTCACGCAGAGCCTGGACGAACTGATTGCCCTCCTCCCGGCCGAGCTGGGAGTCGAGCTCGACGACCTGCAGATCGCGCTGAAGCACCTGCAGAACTTCGAGCCGGCGGGGGTCGGCGCGCGCAACCTCGGGGAATGCCTGGCGCTGCAGCTGTCCGCGCTGCCCAAGAACACGCCGCACCGCGCGCAGGCGCTGGAGACGGCGCAGCACCACCTGGAAGCGCTGGCGGCGCGCGACTTCAACCGGCTGAAGAAGCTGTTGCATTGCGACGACGCGACGCTGCGCAGTGTGCAGAAATTGATCATCGGGCTCAACCCGAAGCCGGGCCGCGCCTTCTCCACCGAGGAGACGCGTTACGTCGTGCCCGACGTCATCGTGAAAAAGGTCAAGGGCGTGTGGCTGGCCGCGCTCAATCCGGACGCGATGCCGCGCCTGCGCATCAACCGCCTCTACGCCGAGATTCTGCAACGCAATCGCAGCTCCGGCGCGCAGCAGCTCTCCAGCCAGCTGCAGGAGGCGAAATGGCTGATCAAGAACGTGCAGCAGCGCTTCGACACCATCCTGCGGGTGGCGCAGGCGATCATCGACCGGCAGCGGCATTTCTTCGAGCATGGCGAAGTGGCGATGCGCCCCCTGGTGTTGCGCGAGATCGCGGACACGCTCGAACTGCACGAGTCCACCGTCTCACGCGTCACCACCCAGAAATTCATGCACACGCCGCGCGGCATCTACGAGCTCAAGTACTTCTTCGGCAGCCACGTCGCCACCGAGGCCGGCGGCGCCGCGTCAAGCACCGCGATCCGGGCGCTCATCCGCCAGCTGGTGACGGCGGAGAACGCGTGCAAGCCGCTCTCCGACGGGCAACTTGCCGAAATCCTGGCGCAGCAGGGCATCACGGTTGCGCGCCGCACCGTGGCGAAGTACCGTGAATCCCTGCAGATCCTGCCGGTCAATCTGAGGAAGGCGTTTTGA
PROTEIN sequence
Length: 497
VRNPKSDTLLAGMKHSLQLRLSQHLTLTPQLQQSIRLLQLSTLELNQELDRILQENPLLEREEGFREQPVPAMDPAAGAADAAPAADTGPAGAAESDSAPAEADPERAELGSPDDAPPSGYRDDAEDGEHQQVAADAPTLRAHLLGQLSLTKVSERDHRLVALLIDSLDDDGYLTQSLDELIALLPAELGVELDDLQIALKHLQNFEPAGVGARNLGECLALQLSALPKNTPHRAQALETAQHHLEALAARDFNRLKKLLHCDDATLRSVQKLIIGLNPKPGRAFSTEETRYVVPDVIVKKVKGVWLAALNPDAMPRLRINRLYAEILQRNRSSGAQQLSSQLQEAKWLIKNVQQRFDTILRVAQAIIDRQRHFFEHGEVAMRPLVLREIADTLELHESTVSRVTTQKFMHTPRGIYELKYFFGSHVATEAGGAASSTAIRALIRQLVTAENACKPLSDGQLAEILAQQGITVARRTVAKYRESLQILPVNLRKAF*