ggKbase home page

SCNpilot_expt_300_bf_scaffold_522_22

Organism: scnpilot_dereplicated_Plasmid_Acidovorax_1

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(13922..16480)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDP5_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 852.0
  • Bit_score: 1672
  • Evalue 0.0
  • rbh
conjugal transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 852.0
  • Bit_score: 1672
  • Evalue 0.0
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:ABM44370.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 852.0
  • Bit_score: 1672
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2559
ATGATCGAAGCAATCGCAATTGCCATTGCTGTGCTCGGTGCGGTTCTGTTGCTCATCCTCTTTGCCCGCATCCGGGCCGTCGATGCCGAGCTGAAGCTCAAGAAGCATCGCGCCAAGGATGCCGGCCTGGCCGATCTGCTCAATTACGCCGCCGTGGTCGATGACGGCGTGATCGTGGGTAAGAACGGCTCCTTCATGGCCGCATGGCTGTACAAGGGGGATGACAACGCCAGCAGCACCGAGGAACAGCGGGAAATGGTGTCGTTCCGCATCAACCAGGCCCTGGCGGGCCTGGGGAACGGCTGGATGGTGCATGTCGATGCTGTGCGTCGGCCTGCGCCGAACTACTCGGAGCGCGGCGTCTCGTCGTTCCCCGACTCTGTGTCCTCGGCCATTGACGAGGAACGCCGGCGCTTGTTCGAGGGCCTGGGCGCGATGTTCGAGGGCTACTTTGTCCTGACCGTCACGTGGTTCCCGCCGGTGCTGGCCCAGCGCAAGTTTGTCGAACTCATGTTCGATGACGATGCGGTGGCTCCCGACCATACGGCGCGCACCACGGGCCTTATCGCGCAGTTCAAGCGCGAGATCACCAGCCTGGAATCTCGCCTGTCCTCGGCGGTCAAGCTGACGCGCCTGCGCGGCCAGAAGGTCGTCTCGGAAGAGGGCAGGGAGGTCACGCACGATGACTTCCTGAGCTGGTTGCAGTTCTGCGTGACGGGCCTGCATCACCCGGTCATGCTGCCCAGCAATCCGATGTACCTCGATGCGGTCATCGGCGGGCAAGAGCTGTGGGGCGGCGTGGTGCCCAAGATCGGGCGCAAGTTCATCCAGGTGGTCGCCATCGAAGGCTTCCCCTTGGAGTCAACGCCTGGGGTGCTCTCGGCCCTGGCCGAGCTGCCCAGCGAATACCGCTGGTCGAGCCGCTTCATCTTCATGGATCAGCACGAGTCCTTGAAGCACCTGGACAAGTTCCGCAAGAAGTGGAAGCAGAAGATTCGCGGCTTCTTCGATCAGGTGTTCAACACGAATACCGGCTCCATCAACCAGGACGCGGCCGCGATGGTCGGCGACGCCGAGGCGGCCATCGCCGAGGTCAACAGCGGCTTGGTGGCGGCCGGCTACTACACCAGCGTGGTCGTGCTGATGGACGAGGATCGGGAGCGCCTGGCGGCCTCCGCGCTCCTGGTCGAGAAGGCAGTCAACCGCCTGGCCTTCGCGGCCCGTATCGAGACGATCAACACGCTCGATGCGTACCTGGGCAGCTTGCCCGGCCACGGTGTCGAGAACGTGCGTCGGCCGCTCATCAACACGATGAACCTGGCCGACCTGCTGCCGACAAGCTCCATCTGGACGGGCAGCGCCACGGCTCCGTGCCCGATGTACCCGCCGCTGTCGCCGGCGCTCATGCACTGCGTGACGGTGGGCGCTACGCCGTTCCGCCTGAACCTGCACGTGCGCGACCTGGGCCACACCTTCATGTTCGGCCCGACCGGCGCGGGCAAATCGACGCACCTGGGGATCATCGCCGCGCAGCTCCGTCGCTACGCCGGCATGTCGATCTACGCCTTCGACAAGGGCATGTCGATGTACCCGCTCGCGGCCGGCATTCGTGCGGCCACGAAGGGCAAGAGCGGCCTGCACTTCACGGTGGCCGCCGACGATGACCGGCTGGCCTTCTGCCCGCTCCAGTTCCTCGAAACGAAGGGGGATCGGGCCTGGGCGATGGAATGGATCGACACCATCCTGACGTTGAACGGTGTCAACACCACGCCGGCGCAGCGCAACGAGATCGGCAACGCGATCATGAGCATGCACGCCAGCGGCGCGCGAACGCTCTCCGAGTTCTCGGTGACGATCCAGGACGCGGCGATCCGCGAGGCGATCAGGCAGTACACGGTGGACGGCTCGATGGGCCACTTGCTCGATGCCGAAGAGGACGGCCTGTCGCTGTCCGACTTCACGGTGTTCGAGATCGAAGAGCTGATGAACCTGGGCGAGAAGTTCGCGCTCCCGGTGCTGCTCTACCTGTTCCGCCGCATCGAGCGCGCACTGAAAGGCCAGCCCTCCGTCATCATCCTGGACGAAGCCTGGTTGATGCTGGGCCACCCGGCGTTCCGCGCCAAGATCAGGGAATGGCTCAAGGTGCTGCGCAAGGCCAACTGCCTTGTGCTGATGGCTACGCAAAGCCTTTCGGACGCGGCCAACTCGGGCATCTTGGACGTGATCGTGGAATCGACCGCGACCAAGATTTTCCTGCCCAACGTCTACGCCAGGGACGAGGACACCTCGGCGCTCTATCGCCGCATGGGCCTCAACGCGCGGCAGATCGAAATCCTGGCGACCGCCATTCCGAAGCGTCAGTACTACTACGTGTCGGAGAACGGCCGCCGTCTCTATGACCTTGCCCTGGGGCCGATGGCCCTGGCCTTCGTCGGCGCGTCCGACAAGGAATCGGTCGCCACCATCAAGAGCCTCGAAGCCAAGTTCGGCCACGAATGGGTGCATGAGTGGCTGGCCGGCCGTGGGCTGAATCTCAACGACTACCTGGAGGCCGCATGA
PROTEIN sequence
Length: 853
MIEAIAIAIAVLGAVLLLILFARIRAVDAELKLKKHRAKDAGLADLLNYAAVVDDGVIVGKNGSFMAAWLYKGDDNASSTEEQREMVSFRINQALAGLGNGWMVHVDAVRRPAPNYSERGVSSFPDSVSSAIDEERRRLFEGLGAMFEGYFVLTVTWFPPVLAQRKFVELMFDDDAVAPDHTARTTGLIAQFKREITSLESRLSSAVKLTRLRGQKVVSEEGREVTHDDFLSWLQFCVTGLHHPVMLPSNPMYLDAVIGGQELWGGVVPKIGRKFIQVVAIEGFPLESTPGVLSALAELPSEYRWSSRFIFMDQHESLKHLDKFRKKWKQKIRGFFDQVFNTNTGSINQDAAAMVGDAEAAIAEVNSGLVAAGYYTSVVVLMDEDRERLAASALLVEKAVNRLAFAARIETINTLDAYLGSLPGHGVENVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFMFGPTGAGKSTHLGIIAAQLRRYAGMSIYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGDRAWAMEWIDTILTLNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDAAIREAIRQYTVDGSMGHLLDAEEDGLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQPSVIILDEAWLMLGHPAFRAKIREWLKVLRKANCLVLMATQSLSDAANSGILDVIVESTATKIFLPNVYARDEDTSALYRRMGLNARQIEILATAIPKRQYYYVSENGRRLYDLALGPMALAFVGASDKESVATIKSLEAKFGHEWVHEWLAGRGLNLNDYLEAA*