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SCNpilot_expt_500_bf_scaffold_277_10

Organism: SCNPILOT_EXPT_1000_BF_Plasmid_61_95

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4163..6160

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system, TraD, DNA-binding domain protein n=3 Tax=Burkholderiales RepID=F4GGS9_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0
  • rbh
type IV secretion system protein TraD similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0
  • rbh
Type IV secretion system, TraD, DNA-binding domain protein {ECO:0000313|EMBL:AEB87049.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 665.0
  • Bit_score: 1304
  • Evalue 0.0

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
ATGGCAAAGAGAGAGGAAAAGGGGAGTGCGGGCAGCTTCTCCCGTGGGGCCGAGTTGTGGATGCACCAAGCCCGGCTGTTCGTGGTGGCGATCTGGACGGTCGTGCTGATTTCCATCCTGGCCGGCTTGGGCGTGACTACCGCCTACTTCTGGAATGCGACGACGGCGGACGAAAAGTACGCGCTGGAGCGGAACGTCCTGGCGCACACGCGGGATGCGCTCTACATGACGGCCGGAAAGATGGAGCTGAACGTCAACGGCGAGCTGCGCAAGATGGAGGTGTCGGAGGTTGCTTTGCTGACCGACGACATGGCCGAGGATGCTTGGCGAAAGCTGCGCAACGGCGGCATGTTCGGTTTGCTGACTTCCATCGGTGTGGTGTTTCTGATCTCTTTGTACTGGTGGGGCTACGGCCGCGAAAGGATGCAGGACAACCAACTGCGCGGGGCCAAACTGGTGGAAGGAAAAGAGCTTGCGCGCCTGATCCGACACCGCGACGAGGCAAGCCCTTATGAGATTGCAGGCGTGCCCATGCGCGTGAAGTCGGAGACGCTGCACACGCTGTTTGCCGGCGCACAGGGTACGGGTAAGTCACAGCAGTTTTTCGCACTCATGAAGCAGGTGCGGGCGCGTGGCAAGCGGATGATCGTGTATGACCCGACCGGCGAGTTCACCCAAGCGTTCTACCGTGAAGGCAAAGACATCCTGATGAATCCGCTGGACTCCAGAAGCCCGAACTGGAACATCTGGAACGAAATCGCCAAGGACTACCACTTCGACAACATGGCGAACGGCCTGATCCCCGATCCGGCCGAGTCCGATCCATTTTGGGCACTTGCTGGCCGGATGGTGCTCAAGGACGTGATCGCAGTATTGGGGCGCGAGGGCCGCCGCACGAACCGCGACCTCTACAACGCTATTGCCAAGAGCAACCTGGACGCCATGCACGCATTGTTGCAGGGAACGGCAGGGGCGACCTATGTTGACCCAACGACCGAGCGCACGGGGATGTCGCTCAAGATGACGGTTCAGAACCAGCTCGAAGCCTTCCGGTTTTTGCCAGATGAAGGTGAATCGTTCTCCATCCGCAAGTGGGTGCATGAGGAAGGCGATTCATGGATGTTCATCACAGCACGGGAGGCGATGCGCGAGGCATTGAAGCCCGTTTTGTCGTTGTGGATCGACACGGCAATCAAGGCCGTACTCGACCTGGAGCCGATCCACCGCGAGCGGCTTTGGTTTTGCATTGACGAGCTGCCGACGCTCCAGAAACTGGACATCCTGAAGCTGGCTCTGACGAATACCAGAAAGTACGGTTTGTGCATGGTGCTGGGCGTGCAAGACTTCAGCCAGCTTTACGAAATCTACGGGCACGATCTGGCCAAGACGATCATTTCCGGGTGCCAGACGAAGCTGCTGCTGCGTGTAACGGATGGGGCTGCGGCGAAGCTGTTGGCCGAATTGATGGGGCAGGCCGAGGTAGATGAAAAGGATGAAACCTTGAGCTACGGCCTCAGTTCGCAGCGTGACGGAGTGAGCGTTATGGCGCGCCGACAGATGCGCGACCTTGTACTGACATCGGAGATTTTGACGTTGCCCGACATGACCGGCTACCTGCTGGTTCCGGGCGACTATCCCATTGCCCGTGTCAAGTACGGCTACGTTCCGACCGAGAAACAAGCCAACGGTTTCATCGAGCGCGACGGCTTTGCGATCAGCTTCAAACCGACCACGGCCGCCGCCGCGCCGGCACCCGCTCAGGCGACCGCCGAAGTTCATCAGCAACCCGCACCGGAGCAAGGCGACATGCTGGATGATGACGATATGGACGCTCCGGCTACGGTGGAGGTTATGCGCAACGAAAACGGTGATGTGATCGACAAGGCGACCGGCGAAATCATCAAGCCGGCCGAGAAGGTTTCGCGCGCGAAAGACGATGCAGATGCGAAATCAGCCGGCCAAGGTAAGAAACCCAACCCGCTGGCGGATGCGCTATAG
PROTEIN sequence
Length: 666
MAKREEKGSAGSFSRGAELWMHQARLFVVAIWTVVLISILAGLGVTTAYFWNATTADEKYALERNVLAHTRDALYMTAGKMELNVNGELRKMEVSEVALLTDDMAEDAWRKLRNGGMFGLLTSIGVVFLISLYWWGYGRERMQDNQLRGAKLVEGKELARLIRHRDEASPYEIAGVPMRVKSETLHTLFAGAQGTGKSQQFFALMKQVRARGKRMIVYDPTGEFTQAFYREGKDILMNPLDSRSPNWNIWNEIAKDYHFDNMANGLIPDPAESDPFWALAGRMVLKDVIAVLGREGRRTNRDLYNAIAKSNLDAMHALLQGTAGATYVDPTTERTGMSLKMTVQNQLEAFRFLPDEGESFSIRKWVHEEGDSWMFITAREAMREALKPVLSLWIDTAIKAVLDLEPIHRERLWFCIDELPTLQKLDILKLALTNTRKYGLCMVLGVQDFSQLYEIYGHDLAKTIISGCQTKLLLRVTDGAAAKLLAELMGQAEVDEKDETLSYGLSSQRDGVSVMARRQMRDLVLTSEILTLPDMTGYLLVPGDYPIARVKYGYVPTEKQANGFIERDGFAISFKPTTAAAAPAPAQATAEVHQQPAPEQGDMLDDDDMDAPATVEVMRNENGDVIDKATGEIIKPAEKVSRAKDDADAKSAGQGKKPNPLADAL*