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scnpilot_solids2_trim150_scaffold_498

Search features with annotation key words

Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_498_31
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28674..29987)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000377121C rbh
UMUC domain-containing protein DNA-repair protein
UMUC domain-containing protein DNA-repair protein {ECO:0000313|EMBL:BAN36837.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_solids2_trim150_scaffold_498_32
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30057..30659)
DNA (603bp) protein (201aa)
DNA polymerase V n=1 Tax=Dyella ginsengisoli RepID=UPI00036E7E17
DNA polymerase V {ECO:0000313|EMBL:AHX13513.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SOS mutagenesis protein UmuD
scnpilot_solids2_trim150_scaffold_498_33
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30744..31487)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B424F3
Uncharacterized protein {ECO:0000313|EMBL:KJV25167.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_498_34
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31796..32062)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:AHX16331.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids2_trim150_scaffold_498_35
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32205..32732)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE14_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89000.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_498_36
unknown

Not on your lists

comp(32816..33259)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_37
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33259..34452)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4R0_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KGD63369.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
scnpilot_solids2_trim150_scaffold_498_38
unknown

Not on your lists

comp(34665..35180)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_39
unknown

Not on your lists

comp(35202..35375)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_40

Not on your lists

comp(35396..35905)
DNA (510bp) protein (170aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YKJ9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD32452.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_498_41
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35950..36396)
DNA (447bp) protein (149aa)
cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
C-type cytochrome biogenesis protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM66_9GAMM
C-type cytochrome biogenesis protein {ECO:0000313|EMBL:EIL88307.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_498_42
unknown

Not on your lists

comp(36393..36752)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_43
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36749..37006)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003480B91
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44304.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_498_44
unknown

Not on your lists

comp(37190..37750)
DNA (561bp) protein (187aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_45
unknown

Not on your lists

comp(37747..38535)
DNA (789bp) protein (263aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_46
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38538..39992)
DNA (1455bp) protein (485aa)
Calx-beta domain-containing protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BAJ1_9XANT
Calx-beta domain-containing protein {ECO:0000313|EMBL:EGD10555.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
IncF plasmid conjugative transfer protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
scnpilot_solids2_trim150_scaffold_498_47
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40010..43462)
DNA (3453bp) protein (1151aa)
Calx-beta domain-containing protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BAJ1_9XANT
Calx-beta domain-containing protein {ECO:0000313|EMBL:EGD10555.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
traN; conjugal transfer mating pair stabilization protein TraN; K12058 conjugal transfer mating pair stabilization protein TraN
scnpilot_solids2_trim150_scaffold_498_48
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43524..44474)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036D100C
TraU protein
TraU family protein {ECO:0000313|EMBL:EGV20607.1}; Flags: Precursor;; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
scnpilot_solids2_trim150_scaffold_498_49
unknown

Not on your lists

44596..44838
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_50
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44807..46285)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037FC7FB
Uncharacterized protein {ECO:0000313|EMBL:EGD10556.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
IncF plasmid conjugative transfer pilus assembly protein TraW
scnpilot_solids2_trim150_scaffold_498_51
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46306..46878)
DNA (573bp) protein (191aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P0_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD10739.1}; Flags: Precursor; Fragment;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
TrhF
scnpilot_solids2_trim150_scaffold_498_52
unknown

Not on your lists

comp(46875..47198)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_498_53
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47195..49678)
DNA (2484bp) protein (828aa)
Type-IV secretion system protein TraC n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P2_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD60335.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
plasmid pilus assembly protein; K12063 conjugal transfer ATP-binding protein TraC rbh
scnpilot_solids2_trim150_scaffold_498_54
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49742..50083)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHD60334.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
hypothetical protein; K12069 conjugal transfer pilus assembly protein TraA
scnpilot_solids2_trim150_scaffold_498_55
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50232..51014)
DNA (783bp) protein (261aa)
Type IV conjugative transfer system lipoprotein (TraV) n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P4_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHM92210.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
type IV conjugative transfer system lipoprotein TraV
scnpilot_solids2_trim150_scaffold_498_56
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51105..52337)
DNA (1233bp) protein (411aa)
TraB pilus assembly protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P5_9XANT
TraB pilus assembly protein {ECO:0000313|EMBL:EGD10744.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
Bacterial conjugation TrbI-like protein
scnpilot_solids2_trim150_scaffold_498_57
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52337..53416)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD10745.1}; Flags: Precursor;; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_498_58
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53477..54055)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P7_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHM92208.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
TraE protein
scnpilot_solids2_trim150_scaffold_498_59
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54052..54339)
DNA (288bp) protein (96aa)
Type IV conjugative transfer system protein TraL n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B9P8_9XANT
conjugal transfer pilus assembly protein TraL; K12068 conjugal transfer pilus assembly protein TraL
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_498_60
unknown

Not on your lists

54556..54792
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying items 31-60 of 81 in total

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