ggKbase home page

FFV18_Bp1_scaffold_628796_14

Organism: FFV18_Bp1_Acidobacteria_54_23

near complete RP 42 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38 MC: 1
Location: 18582..20048

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 491.0
  • Bit_score: 401
  • Evalue 1.20e-108
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 475.0
  • Bit_score: 421
  • Evalue 1.60e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGCCGACTGATCGAAAACAGCAATTGAGAATGACTCCCCATTTGGCCCTCGGTCAGCGCTTGGCTCTCACGCCATCGCTCTTGCAGAAGATTGAACTATTGACCCTATCGAAATTGGAGTTGGAAGAGCTCATCAATGAAGAACTGGTCAACAATCCCCTGCTGGAAGACTACACGGAACTTGACCAGCAAGAGGCGGCCAATGCCGCCAATCAGCAAACTGAGGAGAAAAAACCGGAGGACGGGGTTTTGCCTGAGCGTCCGGCTCTTGAGCTTGATGATAGCGTCGATCTGCAAAAGTTTTTTAATAACTATTTAGATGGCGGTTTTGACGCCCGCGTCGAGCATGAGGACAATGACAAGCCTTCCTTTGAGATGTTTCTGGCGCAAAAGAGTTCTTTATCGGAACATCTGACGGAACAGTTGGGGCTGTCTGAAGCCACCGAGAAGATTAAGCAAATCTCGGCGTTCCTTATTGGCAACCTCGACGAGGGCGGTTATCTCATGATGCCCCTCGAAGAACTGTGCGAGTCGGTACAGTGCCCAATGGAAGAGGCGGAGGCGGCCTTACAGTTGGTCCAGAGCTTCGATCCGATAGGTGTCGCCGCCCGCGATCTGCGAGAATGTTTGCTGATCCAATTAAAAGAAAATGGAGAAGATGGAACTTTGGCGGAAAGGCTGATTGCCGATTGCCTGCCGCTTATGGGAGCCCGAAAATTTAAGGAGATTTGCGCCAAGCTCAATTGTAAGTTCGAGGACATCAAAGAAGCCCTGGATGTTATCAGGCACCTTACTCCGAGGCCAGGCTTAAAGTTTAATATCCGTGATACCCAATACGTCCAGCCGGAGATCTATATCGTCAAAGTGGATAATGAGTATGTTATCCAGCTAAACGATGAGGGGATGCCGATGTTGCGGCTCAATCCCACTTATCGAGCCATGCTAAAGCGTAATACGGTCACCGGAGAAGAAAAAAATTTTCTAAGGGAGAAATTCCGCTCCGCCGTCGATTTGATTCGCAGCGTTAATCAGCGGCGGCAAACCATTTATCGCGTGTGCGAATGCATTGTGCATCGCCAGGGAGAATTTCTCGAGAAAGGCATGCAATTCTTGAAACCTATGCTTATCAAAGACGTCGCGGAAGAGCTGGGCGTTCACCCTTCGACGATCAGCCGCGTGGTCACCAATAAGTACATTCACACGCCGCAAGGAGTGCAGGAACTGCGTAAATTTTTTACCAGCGGTATTGATCGGGCTGATGGAGAAAAGCTGTCTATAGTGCAGGTAAAGTATCGCCTTAAACAGATCATCGAAAACGAGAATCATAAAAACCCTTACGCCGACGAAGAGATCGTTAAAATCTTAGAACGAGAATCACTCACCATTAATCGTCGCACCATCGCCAAGTATAGAGAACAAATGGGAATAGCTGGGTCTCGCGAACGAAAAGTTTCCTATTTGCTTTAA
PROTEIN sequence
Length: 489
MPTDRKQQLRMTPHLALGQRLALTPSLLQKIELLTLSKLELEELINEELVNNPLLEDYTELDQQEAANAANQQTEEKKPEDGVLPERPALELDDSVDLQKFFNNYLDGGFDARVEHEDNDKPSFEMFLAQKSSLSEHLTEQLGLSEATEKIKQISAFLIGNLDEGGYLMMPLEELCESVQCPMEEAEAALQLVQSFDPIGVAARDLRECLLIQLKENGEDGTLAERLIADCLPLMGARKFKEICAKLNCKFEDIKEALDVIRHLTPRPGLKFNIRDTQYVQPEIYIVKVDNEYVIQLNDEGMPMLRLNPTYRAMLKRNTVTGEEKNFLREKFRSAVDLIRSVNQRRQTIYRVCECIVHRQGEFLEKGMQFLKPMLIKDVAEELGVHPSTISRVVTNKYIHTPQGVQELRKFFTSGIDRADGEKLSIVQVKYRLKQIIENENHKNPYADEEIVKILERESLTINRRTIAKYREQMGIAGSRERKVSYLL*