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S1_scaffold_4308_curated_4

Organism: S1_Bosea_sp_LC85_67_10_curated

near complete RP 48 / 55 MC: 4 BSCG 49 / 51 MC: 5 ASCG 10 / 38
Location: comp(1882..2271)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 127.0
  • Bit_score: 162
  • Evalue 2.70e-37
Ribonuclease VapC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0BS80_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 127.0
  • Bit_score: 161
  • Evalue 5.50e-37
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 127.0
  • Bit_score: 162
  • Evalue 5.40e-38

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGATCCTCGTCGACTCGTCTGTCTGGATTGCGTTGCTGCGTGGCGAGGCATCGCCCCAAGTCGCGCAACTGACCGCTGTCGAGCACGTCTCCGATATCCTGATCGGAGACCTCATTCTGACGGAGGTATTGCAAGGAGCGCGCGACGACAAGCATGCTGTGACGATCGAAGCGTCGATGTCCGCTTTTCCCATCGTTCCTCTGCTCGGGGCTGCGCTCGCTCCCCGTGCCGCCGCAAACTATCGCCTGCTTCGCCAACGCGGGATCACCATACGCAAGACGGCCGATGTGATCATCGCCACCTATTGCATCGAGCACGGCCATTTGCTGCTTCATCAGGATCGCGATTTCGATCCGATGATCGAGCATTGCGGCCTTCGCGCGCTTTAG
PROTEIN sequence
Length: 130
VILVDSSVWIALLRGEASPQVAQLTAVEHVSDILIGDLILTEVLQGARDDKHAVTIEASMSAFPIVPLLGAALAPRAAANYRLLRQRGITIRKTADVIIATYCIEHGHLLLHQDRDFDPMIEHCGLRAL*