ggKbase home page

S12_scaffold_104_curated_6

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(8062..8970)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KHS47756.1}; EC=4.1.3.4 {ECO:0000313|EMBL:KHS47756.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 300.0
  • Bit_score: 490
  • Evalue 1.70e-135
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4) similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 299.0
  • Bit_score: 481
  • Evalue 9.40e-134
  • rbh
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 299.0
  • Bit_score: 481
  • Evalue 3.30e-133
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGAGCGCGATCACGTTTGTCGAGGTCGGCCCGCGTGACGGGCTGCAGAACGAAAAGACGATGATCTCCACGGCAGACAAGCTGGCGCTGATTGGCCGCAGCATCGCGGCGGGTGCGCGCCGGATCGAAGTGACCAGCTTCGTCAACCCCCGGCGCGTGCCGCAGATGGCCGATGCCGAGGCAGTTTGCGCCGGACTGCCGCAGGGGACCGGCGCCAGCTTCATCGGTCTGGTGCTCAACGCGCGCGGGGCCGAACGCGCCATCGCCACAGGGGCCTTACACGAACTTGGCGCAGTCTGCGTGGCGACCGATCGTTTCGCCATCGCCAACCAGGGCCAGACCAGCGCCGAATCGGTCGCTTCCGCCAGCGCCATCGTCACCGTGGCGAACGCCGCCGGTCTGCACGGGCAGGCAACCATCGCGGCGGCATTCGGATGCCCCTTCGAAGGCGAAGTGCCCGAAGACCGCGTCGTGGCCATGGCCGAAGCCCTTGCCCAGGCCGGGCCGGTCGAAGTGGCGCTGGCCGATACCATCGGCGTGGCCGACCCGGCGCACGTTTCAAGGCTTGTCCGGCGCGTGGCAAAGGCCATCGCACCGCTGCCGGTACGTGTGCACTTCCACAACACCCGCGGCACCGGCATCGCCAATGTCTGGGCGGCGGTGGAGGCCGGGGCGAGCGTGGTCGACGCCGCGCTGGGCGGCCTTGGCGGATGCCCCTTCGCGCCGGGCGCCGCCGGCAACGTCGCCAGCGAGGACGTGGTCTACATGCTCCACCGCGCCGGCGTGGCCACGGGCATGGACCTTGACCAGCTGATCGACGCCAGCCGCTGGCTGGCCGGGGTGATGGACCGCAAACTTCCCGGAATGGTGGCGCATGCGCCCGCCTTTCCCCAAGCCGTTCAGGAGTAG
PROTEIN sequence
Length: 303
MSAITFVEVGPRDGLQNEKTMISTADKLALIGRSIAAGARRIEVTSFVNPRRVPQMADAEAVCAGLPQGTGASFIGLVLNARGAERAIATGALHELGAVCVATDRFAIANQGQTSAESVASASAIVTVANAAGLHGQATIAAAFGCPFEGEVPEDRVVAMAEALAQAGPVEVALADTIGVADPAHVSRLVRRVAKAIAPLPVRVHFHNTRGTGIANVWAAVEAGASVVDAALGGLGGCPFAPGAAGNVASEDVVYMLHRAGVATGMDLDQLIDASRWLAGVMDRKLPGMVAHAPAFPQAVQE*