ggKbase home page

S12_scaffold_4508_curated_3

Organism: S12_Rhizobiales_64_8_curated

partial RP 41 / 55 MC: 9 BSCG 38 / 51 MC: 9 ASCG 7 / 38 MC: 2
Location: 1357..1944

Top 3 Functional Annotations

Value Algorithm Source
Putative IS256 family transposase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C7P2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 104.0
  • Bit_score: 133
  • Evalue 1.40e-28
Probable transposase {ECO:0000313|EMBL:BAN09786.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 116.0
  • Bit_score: 133
  • Evalue 2.60e-28
Probable transposase similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 71.0
  • Bit_score: 130
  • Evalue 3.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGTGCATCGGCCTGCCCGCACCTTCGTGCTCCCGGTACCTCTGTCCTGGATGGTCGCATCATACGCCACGGACAAGAGATCCGCAGCCGGACTTCGGCACCAGCCATCTCATACCGGTTACGAACCCGATCGAGCGCCTCAACGGCGAGATCAAGCAGCGCACCGACGTGGTCGGGATCTTCCCGAACGACGACGCCATCGTCCGTCTCGTCGGAGCCTTGCTGCTCGAACAAAACGACGAGTGGGCCGTCCAGCGCGCCCGCTACATGACGCTGGAAAGCGTCGGCCAGTTGAGCGATGATCCCCTCATCAGCCTGCCAAGCGAACTTCGTTATGTCGAAAGGCCCGAACACTACACCCCGCGAGACGTCGCCAACGCATTCTCGGAAGCGCTCAATCGAACCGTCCGAGTTTCGGTGATCCCGCGTGAGGACTGGAACGAGACCTTTGTGCAGATCGGCTTCTCTCAAGCCGCGGCGGATTCCTATGCGCGCATGACGGGCACGGTTGCGATAGCGGGCCGGAGAAGCCGAACGCCCCTGAGCGGGGGCGCATCACTCTCAAGGACTACATCCGGGATGTTGTGA
PROTEIN sequence
Length: 196
MCIGLPAPSCSRYLCPGWSHHTPRTRDPQPDFGTSHLIPVTNPIERLNGEIKQRTDVVGIFPNDDAIVRLVGALLLEQNDEWAVQRARYMTLESVGQLSDDPLISLPSELRYVERPEHYTPRDVANAFSEALNRTVRVSVIPREDWNETFVQIGFSQAAADSYARMTGTVAIAGRRSRTPLSGGASLSRTTSGML*