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S12_scaffold_194_curated_12

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(11931..12710)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFC954 related cluster n=1 Tax=unknown RepID=UPI0003CFC954 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 215.0
  • Bit_score: 311
  • Evalue 5.10e-82
  • rbh
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAK71929.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 233.0
  • Bit_score: 320
  • Evalue 1.20e-84
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 221.0
  • Bit_score: 220
  • Evalue 3.40e-55

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGAAGAGAAGCGACGAAAGCTCGGAGCCGCGATCCCCGACGCGCCGTCCTCCGCCACCGTGCTCGACATCGGTCCGGGTGCCGGCTCGCCTGCGGCGCCGGCGCTGGAGCCGGTCAATCCGCGCCTGCCGATCGCCCCGCAGATCTATGAGCGGCTGCGGCGGGCCATCACCACGCTGATCGTGCTGCCGTCCGAGGCGTTGAGCGAGAAGGAACTCTCGCTCCAGCTCGGCGTCAGCCGCACGCCCGTGCGCGAGGCGCTGATCCGGCTCGCCGATGAAGGACTGGTCGATATCCTGCCCCAGCGCGGCAGCTTCGTCGCGCCGATCCGGCTGCGGGATGTCGAGGAGGCCCAGTTCATTCGCGAATCGCTGGAGGTCGCCGTGGCGCGCCGTCTGGCGGGCCATTGTTCGCCGCGCTTCCTCGCGGAGCTGAAGCTCAACCTCGCGCGGCAGGAGAGCGCCGTCGTCGAACGGGACCGCGACCTGTTCATGGAGCTGGACGAGGCGTTCCATCGCGGGCTCTGCGAGGAGGCGGGCCTCTCCAAAAGCTGGCGTGTCATCCAGTCGGTGAAGCTGCAGATGGACCGGGTGCGCTATCTCAGCCTGCCCGAGCCCGGCCATCTCGACGTGCTTCTCGCCCAGCACCGGCAGATCACCCATGCGATCGAGGCCGGGGAGACGGAAGAGGCGGGGCGGCACATGTCCGCTCACCTCAAGGAAGTTCTGGGTTCCGCCAATCTGCTGCGTCAGAAGCTGGCGCATCTGATCGAGAAATAG
PROTEIN sequence
Length: 260
MEEKRRKLGAAIPDAPSSATVLDIGPGAGSPAAPALEPVNPRLPIAPQIYERLRRAITTLIVLPSEALSEKELSLQLGVSRTPVREALIRLADEGLVDILPQRGSFVAPIRLRDVEEAQFIRESLEVAVARRLAGHCSPRFLAELKLNLARQESAVVERDRDLFMELDEAFHRGLCEEAGLSKSWRVIQSVKLQMDRVRYLSLPEPGHLDVLLAQHRQITHAIEAGETEEAGRHMSAHLKEVLGSANLLRQKLAHLIEK*