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S12_scaffold_532_curated_33

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(36128..36409)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8P9_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 93.0
  • Bit_score: 162
  • Evalue 1.40e-37
collagen similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 93.0
  • Bit_score: 162
  • Evalue 3.90e-38
Collagen triple helix repeat protein {ECO:0000313|EMBL:ADH90583.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 93.0
  • Bit_score: 162
  • Evalue 1.90e-37

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
CCGGCCGGCGCGACAGGCCCTGCGGGCCCGGCGGGCGACAAGGGCGAGGCGGCCAGCATGGCGCAGGCGCCCGGTGCGGTGCGGGTCTACACCCGTCGCGAGTGCTTCTCGCCGGAAGGCTGCCACATGACCTGCGAACCCGACGAGGTCGTGGTCAACGCCTATCTCGCCCCGCATGAAGGCGAGACGACCATCCTGAGCGAGCGGGAAGTCCGCTTCGCGCCGAAGCCGGCGGATGCCGCGCGCGCGCCGCTGATGGTGCTCATCTGCGCCCGCAAGTGA
PROTEIN sequence
Length: 94
PAGATGPAGPAGDKGEAASMAQAPGAVRVYTRRECFSPEGCHMTCEPDEVVVNAYLAPHEGETTILSEREVRFAPKPADAARAPLMVLICARK*