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S15_scaffold_547_curated_19

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(16828..17220)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 256
  • Evalue 1.80e-65
DNA-directed RNA polymerase subunit omega n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6W3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 256
  • Evalue 1.30e-65
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 130.0
  • Bit_score: 252
  • Evalue 4.00e-65

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGCGCGTCACTGTTGAAGATTGTATCGATAAGGTCGACAACCGGTTCGACCTCGTATTGCTGGCCGCACACCGTGCGCGGATGATCTCCTCAGGGTCGCCCCTGACCATCGACCGGGATAATGACAAGAATCCGGTGGTTTCGCTACGTGAAATCGCTGATACGACCATTTCTCCCGAGGATTTGCGGGAAGAACTGGTCCATTCCCTCCAGAAATTCGTCGAAGTGGACGAGCCGGAACCCGATACTGTGCCGCTGATCGGCTCGGCAGGCGCCTCCGTTGACGCCGACGACACCGAAGTAGCCGTCGAGCGCATGACGGAAGAAGAGCTTTTGAAGGGTCTGGAAGGCCTTGCTCCCCCCGAGGAGCAGCCCGAGGAAGACGAGTAA
PROTEIN sequence
Length: 131
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPLTIDRDNDKNPVVSLREIADTTISPEDLREELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVAVERMTEEELLKGLEGLAPPEEQPEEDE*