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S15_scaffold_239_curated_31

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 36233..37135

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator YbhD n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R4S3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 300.0
  • Bit_score: 559
  • Evalue 1.20e-156
  • rbh
Regulatory protein, LysR substrate-binding protein {ECO:0000313|EMBL:BAQ74002.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 298.0
  • Bit_score: 563
  • Evalue 9.30e-158
regulatory protein, LysR substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 300.0
  • Bit_score: 559
  • Evalue 3.50e-157

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGACGGTTAAACAGATTCGGGCCTTTCTGGCGGTGGCCCACAGTTTGAGCTTTGCCCTGGCCTGCGAGCGCCTGCACCTGTCGCAGTCGGCCTTGAGCCTGACCATCAAGGCTTTGGAAGAAGGCTTGGGCGGACGGTTGTTTACCCGCAATACACGCAATGTGGCGCTGACCCCTGAAGGCGAGGCTCTGCTGCCTCTGGCCCGGCGCCTGATCGCCGATTGGGACAACGCCGAGGACGAACTGCGCCAGCGTTTCACCCTGCAGCGCGGGCGGGTGACGGTGGCGGCCATGCCGTCCTTTGCCGGCAATCTGCTGCCGCCGATCCTCAAGCGCTTTCGCGCCCGCTACCCCCAGGTCAACGTCACGGTCAATGACGTGGTCAACGAGCAGGTGCTGGAGATGGTCCGCGACCGCGAGGTGGAACTGGGGGTGGCGTTCGAGCCTCAGGACAGCACTTCCTTGCTCTTCACCCCGCTGTACATCGACCGTTTCGTGGCCGTGGTGCCCAAGGATTCGCCCCTGGCGCAGCGCAGCCGCATCGACTGGCAGACGCTGCTGCAGGAGCCCTTTATCACCCTGCAGCGGCCGTCCACGGTGCGGGTGATGCTGGAGGACCATCTGCGGGCCCGGGGCGTGCAGTTGCCGGTGGAATTTGAAAGCCACCAGTTGGCGACCGTGGGGCGCATGGTCGCCAGCGGCCTGGGCGTCAGTGCGGTGCCGGCGCTGTGTGCCCAGCACATGCGCGAGCTGGGCGGGCATTGCCTGACCCTGGATGATCCGGTGGTGGAGCGGGCCATCGGCGTCTTGACCAAGCCGGGGGAGGAGTTGTCCACCGCGGCCCAGGCGCTGTTCGACATCCTGCGCGAGGAAAACCTCGACCAGCGCGTTGCCATGCTTTGA
PROTEIN sequence
Length: 301
MTVKQIRAFLAVAHSLSFALACERLHLSQSALSLTIKALEEGLGGRLFTRNTRNVALTPEGEALLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKRFRARYPQVNVTVNDVVNEQVLEMVRDREVELGVAFEPQDSTSLLFTPLYIDRFVAVVPKDSPLAQRSRIDWQTLLQEPFITLQRPSTVRVMLEDHLRARGVQLPVEFESHQLATVGRMVASGLGVSAVPALCAQHMRELGGHCLTLDDPVVERAIGVLTKPGEELSTAAQALFDILREENLDQRVAML*