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S16_scaffold_2428_curated_3

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 3512..4204

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase principal sigma factor hrdB n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CXA0_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 230.0
  • Bit_score: 376
  • Evalue 1.50e-101
  • rbh
RNA polymerase principal sigma factor hrdB {ECO:0000313|EMBL:EZP43110.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 230.0
  • Bit_score: 447
  • Evalue 9.70e-123
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 370
  • Evalue 1.80e-100
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGAAGCCCGGCAACCCCGAAACGTGCCCTCGGGCGTTTTTCCTGTTGATCCCCTCCCGGTTCCTGCCGTGACTGTCGCCCTGTCCCACCCCATCGCTGGCTATGCGCAACCGCCTGCAGGGCTTACCCTGTACGGCGTGGATGCCAGCGCCCTGCCAACCGATGAAGCCTTGATGCTGGCCTGGGCCGCCGGTGAAGTGCACGCGTTCGAAAGCCTGTATGCCCGTCATCGCAAGCGCCTGTTCGGCTTCCTGCTGCGGCAGCTGCGCGACACCGCGCTGGCCGAGGAGATGTTCCAGGACGTCTGGCAGCGGGTGATCAGCGCGCGTGCAGGCTGGCAGGCCGATGCCGCCTTCAGCACCTGGCTGTTCCGCATCGCCCACAACCGCCTGAACGACCACTGGCGCGCCGCCCGCCATCGCCCCCCTGCACCGGCCGATGCCGATCTGCGCCTGGCCGCGCTGGAAGATGGGCAGACACCGGAAGCGGAATTGTCCGAATTCGAGCAACGTCGCCGCATCCAGCTGGCGATGGAAGAACTGCCCGCAGAACAGCGCGAAGTGCTGCAGCTGCGGCTGGAACAGGAACTGAGCCTGGAGGAGATCGGCCAGATCACCGGCGTTGGCCGGGAAACCGTGAAATCGCGGCTGCGCTATGCGAnnnnnnnnnnGCGTGCGGGACTGAACGCATGA
PROTEIN sequence
Length: 231
MEARQPRNVPSGVFPVDPLPVPAVTVALSHPIAGYAQPPAGLTLYGVDASALPTDEALMLAWAAGEVHAFESLYARHRKRLFGFLLRQLRDTALAEEMFQDVWQRVISARAGWQADAAFSTWLFRIAHNRLNDHWRAARHRPPAPADADLRLAALEDGQTPEAELSEFEQRRRIQLAMEELPAEQREVLQLRLEQELSLEEIGQITGVGRETVKSRLRYAXXXXRAGLNA*