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S16_scaffold_3524_curated_4

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 1697..2197

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Stenotrophomonas maltophilia RepID=J7VRN7_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 166.0
  • Bit_score: 287
  • Evalue 5.10e-75
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EZP44710.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 309
  • Evalue 2.30e-81
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 166.0
  • Bit_score: 287
  • Evalue 1.40e-75

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGTCCTCCAATGCCCTCACCCTGACCGAACTGCTGATCCGCGAACGACCGGCACTGCTGCGACGCGTGCAGCGCATCCTCGGCGGCGACAGCGGGGCCGAAGACGTGATCCAGGCGGTCTGGTTCAAGGCACGTGGGGTAGACAGCAGCCAGGGCATCGACAATCCGCGCGCCTATCTCTATCGATTGGCCATCAACCTCGCCACCGACCACGGCCGCGAATCGACGCGCCGCAACCGCCTGCTGGCCnnnnnnnnnnnnnnnnnnGAGGACGAGCAGATCTCCACCGAGGAACAGGTGATGGCGCAGGATGAACTGCAGCGTGTGCTTGATGCCGCCGGCCACCTGCCCGAGCCGACGCGCACCATCTTTCATCTCAATCGCCTGCAGGGCCTTACCCAGGCCGACATCGCCCGGCGCCTCGGTGTGTCGGTGACCACGGTGGAGAACCACGTACGCACCGCGCTGCAGCGGCTTGCCTGGGCGCGCAGTGGCCGATGA
PROTEIN sequence
Length: 167
MSSNALTLTELLIRERPALLRRVQRILGGDSGAEDVIQAVWFKARGVDSSQGIDNPRAYLYRLAINLATDHGRESTRRNRLLAXXXXXXEDEQISTEEQVMAQDELQRVLDAAGHLPEPTRTIFHLNRLQGLTQADIARRLGVSVTTVENHVRTALQRLAWARSGR*