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S16_scaffold_3979_curated_6

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4304..4993)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=3 Tax=Xanthomonas campestris pv. translucens RepID=L0T100_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 452
  • Evalue 2.10e-124
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 452
  • Evalue 6.10e-125
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 229.0
  • Bit_score: 452
  • Evalue 3.00e-124

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
CTGGTGATCTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCCACGTATGCGACCTGGTGGATCCGCCAGGCCATCACCCGTTCGATCGCCGACCAGGCGCGCACCATCCGTATTCCGGTGCACATGATCGAAACGATCAACAAGTTGAACCGCATTTCCCGCCAGATGCTCCAGCAGTACGGCCGCGAGGCTACGCCGGAGGAGCTGGCCAAGGAAATGGACATGCCGGAAGACAAGATCCGCAAGGTGATGAAGATCGCCAAAGAGCCGATCTCGATGGAAACCCCGATCGGCGACGACGAGGATTCCCATCTGGGCGACTTCATCGAGGACACCAACGTGGAGTCCCCGATCGAGAACACCACCAACATCAACCTGTCTGAAACCGTGCGCGACGTGCTGGCCGGCCTCACCCCGAGGGAAGCCAAGGTGCTGCGCATGCGCTTCGGCATCGACATGAATACCGACCACACCCTTGAGGAAGTCGGCAAGCAGTTCGACGTGACCCGCGAGCGCATCCGCCAGATCGAAGCGAAGGCCCTGCGCAAGCTGCGTCACCCGAGCCGTTCGGAGCAGCTGCGCAGCTTCCTGGATATCGATTGA
PROTEIN sequence
Length: 230
LVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQYGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIENTTNINLSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDID*