ggKbase home page

S16_scaffold_1740_curated_6

Organism: S16_RifleBG_Stenotrophomonas_66_10_curated

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4762..5892)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJ84_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 380.0
  • Bit_score: 659
  • Evalue 1.40e-186
  • rbh
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EZP45371.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 351.0
  • Bit_score: 693
  • Evalue 9.70e-197
methyltransferase small similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 351.0
  • Bit_score: 656
  • Evalue 2.70e-186
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
TTGAAGTTTCGCAAAGCGGTGGCCGGGGCCGGGCCGGGGCGGACAAGCCGGTACAATGnnnnnnnnnnnnnnnnCGACGCCCCCCTGCAGACCCTGTTCCTGCCGTTCTCCAGCGGCGCCCTGCGCTGGCCGGAGGGTCCGGTGGCCTTCCTGCGCGCCCGTGACGGCTGGCCACTGCGCGAGCAGGCCGGCGGCCGCGAGGTCGACTGCGAGCnnnnnnnnnnnnnnnnnnnnnnnnCGCTGCAGCAGGCCGCTGGCTGGACCGTCAGCGGGCAGCTGGATGATGTTGCCGGCCGCGGCCGTTACCCGCTGGTGCTGGTGCTGCCGCCGCGCCAGCGCGAGGAAGCCCGCGCGCTGTTCGCCCGCGCCCTGGCGCTGGTCGCCGAGGGTGGCCGCATCGTGGCCTGCCAGCACAACAACGAAGGTGCCCGCTCCGGCGAAGGCGACCTCAAGCAGCTGGCCGGCCTCGGCGGCAGCCTGACCAAGAACCACTGCCGCGTGTTCTGGACCGCTCCGCTGCAGGGCCAGCACGATGTGGACGTAGCCAAGCGCTGGGGCGCGCTGGACGCGGTGCGGCCGATCGTCGGCGGCCGTTTCCTCAGCCGTCCGGGCGTGTTCGCCTGGGACCGCATCGACCCGGCGTCGGCCCTGCTGGCCGAGCATCTGCCGGCCGACCTGGCCGGGCGTGCAGCTGACCTCGGTGCCGGTTACGGCTACCTGTCGCGTGAACTGCTGGAGCGCTGCCCGAAGATCACCGCGCTGGACCTGTACGAGGCCGAGAAGCGAGCGCTGGACTTGGCCGAACTCAATCTGGCGCCGCCACCGCGCCCCGTGCCGCTGCGCTTCCTGTGGCGCGACGTCACCGCCGGTATCGAGCCGGACTACGACGTCATCATCAGCAACCCGCCGTTCCACACGCCCTCGCGTGCGGATCGCCCGGACATCGGCCAGCGCTTCATCGCCGTGGCCGCGCAGGCGCTGCGCCCGGGTGGGCGCCTGTACGTGGTGGCCAACCGCCACCTGCCCTACGAGTACACGCTCAACGAGAGCTTCGGCGCGGTGCGCGTGGTTGCCGAGCGCGATGGCTTCAAGCTGGTCGAAGCGGTGAAGGGCAAGGGGAAGGGCCGGTGA
PROTEIN sequence
Length: 377
LKFRKAVAGAGPGRTSRYNXXXXXXDAPLQTLFLPFSSGALRWPEGPVAFLRARDGWPLREQAGGREVDCEXXXXXXXXXLQQAAGWTVSGQLDDVAGRGRYPLVLVLPPRQREEARALFARALALVAEGGRIVACQHNNEGARSGEGDLKQLAGLGGSLTKNHCRVFWTAPLQGQHDVDVAKRWGALDAVRPIVGGRFLSRPGVFAWDRIDPASALLAEHLPADLAGRAADLGAGYGYLSRELLERCPKITALDLYEAEKRALDLAELNLAPPPRPVPLRFLWRDVTAGIEPDYDVIISNPPFHTPSRADRPDIGQRFIAVAAQALRPGGRLYVVANRHLPYEYTLNESFGAVRVVAERDGFKLVEAVKGKGKGR*