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S18_RifleGW_Spirochatetes_52_9_curated

FUEL_CELL_S18_BJP_08E140C01_Spirochaeta_53_29_51_1
In projects: FUEL_CELL_S18  |  fuel_cell_curated

Consensus taxonomy: BJP_08E140C01_Spirochaeta_53_29  →  Spirochaeta  →  Spirochaetales  →  Spirochaetia  →  Spirochatetes  →  Bacteria

Taxonomy override: Spirochaetes

Metagenomic Context

Parent: FUEL_CELL_S18_Spirochatetes_52_9 Manually curated genome
Original version: FUEL_CELL_S18_Spirochatetes_52_9

Properties

Avg. coverage: 1.00 Longest contig: 21.62 Kbp Bin length: 1.21 Mbp GC content: 50.51 %
Contigs count: 327 Features count: 1339 rRNAs count: 0 tRNAs count: 12

Genome completeness

partial RP 34 / 55 BSCG 36 / 51 ASCG 8 / 38
Displaying items 201-250 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S18_scaffold_5046_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 2588 bp 52.47 1.00 100.27
S18_scaffold_4183_curated
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 3064 bp 50.55 1.00 86.46
S18_scaffold_13843_curated
Species: BJP_IG2069_Spirochaetales_48_31 (50%)
2 1017 bp 41.89 1.00 99.41
S18_scaffold_9098_curated
Species: Sphaerochaeta globosa (50%)
2 2748 bp 54.51 1.00 63.54
S18_scaffold_10345_curated
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1248 bp 48.80 1.00 56.49
S18_scaffold_13578_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1219 bp 51.93 1.00 97.21
S18_scaffold_13476_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1215 bp 51.44 1.00 82.96
S18_scaffold_8130_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1817 bp 51.13 1.00 59.44
S18_scaffold_4804_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2702 bp 53.33 1.00 100.37
S18_scaffold_7931_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1821 bp 54.75 1.00 88.96
S18_scaffold_10754_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1439 bp 52.95 1.00 53.79
S18_scaffold_10004_curated 2 1325 bp 50.72 1.00 21.96
S18_scaffold_15381_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1107 bp 52.94 1.00 100.81
S18_scaffold_13629_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1215 bp 52.67 1.00 90.12
S18_scaffold_13434_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1253 bp 60.18 1.00 100.80
S18_scaffold_14570_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
2 1155 bp 49.44 1.00 86.75
S18_scaffold_14949_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1132 bp 48.06 1.00 94.61
S18_scaffold_5131_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2441 bp 51.50 1.00 79.39
S18_scaffold_9169_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1653 bp 51.30 1.00 99.46
S18_scaffold_10592_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1463 bp 49.42 1.00 80.59
S18_scaffold_10284_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1512 bp 54.83 1.00 88.69
S18_scaffold_8088_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1823 bp 43.66 1.00 57.93
S18_scaffold_15847_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1083 bp 47.55 1.00 91.69
S18_scaffold_12815_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1190 bp 51.93 1.00 98.07
S18_scaffold_12592_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
2 1292 bp 48.61 1.00 99.85
S18_scaffold_12101_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1303 bp 52.57 1.00 56.18
S18_scaffold_5451_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2223 bp 48.27 1.00 74.49
S18_scaffold_9247_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1641 bp 58.32 1.00 95.43
S18_scaffold_12355_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1303 bp 54.64 1.00 100.15
S18_scaffold_3851_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 3242 bp 50.43 1.00 90.78
S18_scaffold_9624_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1565 bp 49.84 1.00 66.52
S18_scaffold_16299_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1059 bp 51.65 1.00 81.02
S18_scaffold_6610_curated
Species: Dialister sp. CAG:486 (50%)
2 1999 bp 46.97 1.00 36.62
S18_scaffold_12643_curated
Species: RIFOXYC1_FULL_Spirochaetes_54_7_curated (100%)
2 1275 bp 53.18 1.00 100.00
S18_scaffold_6102_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2236 bp 51.30 1.00 96.87
S18_scaffold_17086_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1015 bp 54.78 1.00 100.49
S18_scaffold_17326_curated
Species: GWB1_Spirochaetes_59_5_curated (50%)
2 1012 bp 49.80 1.00 85.08
S18_scaffold_10815_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1293 bp 55.07 1.00 100.23
S18_scaffold_8835_curated 2 1705 bp 48.09 1.00 42.40
S18_scaffold_4039_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 3058 bp 49.54 1.00 84.96
S18_scaffold_7131_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2000 bp 56.75 1.00 81.30
S18_scaffold_3475_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 3562 bp 55.39 1.00 100.06
S18_scaffold_13197_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1214 bp 50.25 1.00 79.08
S18_scaffold_12671_curated
Species: RBG_16_Spirochaete_67_19_curated (50%)
2 1285 bp 44.75 1.00 97.82
S18_scaffold_11171_curated
Species: Sphaerochaeta pleomorpha (50%)
2 1344 bp 51.93 1.00 67.41
S18_scaffold_11480_curated
Species: Spirochaeta smaragdinae (50%)
2 1269 bp 51.93 1.00 40.66
S18_scaffold_35025_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1100 bp 49.27 1.00 39.82
S18_scaffold_13413_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1189 bp 50.38 1.00 97.65
S18_scaffold_12209_curated
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1310 bp 50.69 1.00 98.47
S18_scaffold_15883_curated
Species: GWB1_Spirochaetes_59_5_curated (50%)
2 1081 bp 52.73 1.00 100.46
Displaying items 201-250 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.