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S20_scaffold_547_curated_19

Organism: S20_RifleGW_Geobacter_56_21_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(23073..25259)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein cytochrome c, 12 heme-binding sites n=2 Tax=Geobacter sulfurreducens RepID=D7ALQ0_GEOSK similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 775.0
  • Bit_score: 817
  • Evalue 1.10e-233
  • rbh
omcB; lipoprotein cytochrome c similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 775.0
  • Bit_score: 817
  • Evalue 3.00e-234
  • rbh
C-type polyheme cytochrome OmcB; Outer membrane c-type cytochrome B; Flags: Precursor;; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 775.0
  • Bit_score: 817
  • Evalue 1.50e-233

Lists

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Notes

OmcB-like multiheme cytochrome with 12 CxxCH motifs Tyler Arbour (4/8/17)

Taxonomy

Geobacter sulfurreducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2187
ACCCTGGCGGCGGCAATGGCCGGCTGCGGCACCAGCAACAAGGAAGGCGCCATCTCCCTGGACAGCGTTGCCAAGGTGGATGAAACCCTCTGCGCACAATGCCACGGCGCGGCAATCGAGACATTGTCGGGCGACAGCATTTACGAGAAGTACACCGAGTCAGTCCATGCATTGAAATCAGTAGGTTGCCAGGACTGCCACGGCGGCGGCGCTCAGCATAACGGCATCGGGCCGATTCCCTATGCGAAGCCGAATGATGAGCAGTGTAAAAGCTGCCATGATGATGACGGGCTTGTGACCAAATATCAGGCATCGGCTCATAAGAATGCCGAAATGGAAGATGGCGAAGAAAAATGTAACCGCTGCCATACCCACCAGGGTGCGGTTTTATCGGCAAAATTTCATTTCACGGGCGACAAGACTGTCATGGATGCCAAGGTCAATGCTCCCGGTGCTATAGCCGAACCTGAGCCGATCAAATGCAACACCTGCCATGAGACCCACAAGCCGCAGGACCTGCGGGTAGATTCAAACTGGAATCCGAGTACCACTGTTGGCGCAGTTACTACCGGCGGAGATGGATATGACCAGTTCAGGCTTTGTACCCAGTGCCATACCTATACGGACGCTGACGGCAAGCTTGCTGCATCCGGGACAGCACCCACAACGAAGTTCTACCACAACACCGCATGGTACAGAATTATCGGCACAACCCACTATGACAACCCTGCCACTCCCGCAGTAGTTGAAGGATACAACCTGCGTACAACCGGCCCCGATAACTCCGATCCGTGCTTCGATTGCCACGGCCATGAATCAAAAACCAATACCCGTCCTGGCCGTGACGCCACCATTCATACCGACTGGGCCAATTCCGCTCACGGCGGCAAATTGTTGTATGCTAAATATTCCACGGCAACCGCCAATCCCGTTACCGCTTCCAGAACTGGAAACCCGACACTGTATGCAACCCAGGGCGTGGCCCAGGTTGATGCGGTACGTGCCGCCGGTTCGATCGACAACCCAGCTGCAAATAATGGTGCCCCCGGCTGGACCCACTACAGTTGGGACAAGACCTTGAAAGCGGATGGTTCCGATGCCGATGCCGATCCGGACAAAGATCGTGCCGATTGCCAGCGCTGCCATACAGCAACAGGATTGTCAAACTACCTGAGCGCACCGACCACCTACAACCCCTTGAACAATGACTTCTCCCACCTTTCCGGCTGGACTGCCATGGCAGGTTCGGGACAGAACGAGCTGCTTTACTGCTGGGGCTGCCACTCAAATGCCGGCAATGGCACGCTGCGTAACCCGGGCGCTATAACCGAGAATTATGCTGCAATTAACAATACAACTACAGGGACAACCGGCACGGCAGCGACTGTCACGTATCCTGACGCTAAGGGCTCAAACGTTTGTATGAGCTGCCACCTTGGTCGTGAGGTAGGTCAAAACATTACCAACACAACAGATGCTGATGGCGATTTGGGTTTTATCAACTCTCACTACCTGGCAGCAGGTGGAACACTCTTCGGCACCACCGGCTATGAGTTTGCTGACAGAGACTATGTAAATCGTTCCAGTTTCAAGCATGACAAAATCGGTTCCGCCGATGCCCCGGGAACTGGCTCCAACGGTCCTTGTGTCGGCTGCCACATGACCACGCCGAACAGCCACAATTTCACCAACGTAACCAAAAATGCGGCCGGCGAAATTACCGCCATCACCAGCACCGCCTGCGTGACCTGTCACTCCGGAAATTATGCACTCACACCGGAGGCATTGACTACCGAGGAAGAAGAATATGTTGCCGCCCTGGATGCTCTCAAGGCAACCTTGGCCAGCAAAGGGATCTACTTCCACAATGCGCATCCATATTTCTACAATGGTGCGAATGGTACCGGCGGTGCTTTCACCAACTGGGCGGGAGTGTATGGTCTCACAGAATGGAAAAACAGCATGGGCGCAGCCTTCAACTTCAACCTGCTTGAGCATGATCCAGGCGGGTACGCCCACAACCGCTACTATGCCAAGCGCCTGATCTGGGATTCCATCGACTACATCTATGACGGAACCCTTAATCATGACGTAGTAGAGGCGATCGATGCCCAGGTCACCGCCGCACGGCTCGATGCTGCCGTTGCTGCCGAGGCTAAAACCTATCTCGGTACTGCCCGGAGATGA
PROTEIN sequence
Length: 729
TLAAAMAGCGTSNKEGAISLDSVAKVDETLCAQCHGAAIETLSGDSIYEKYTESVHALKSVGCQDCHGGGAQHNGIGPIPYAKPNDEQCKSCHDDDGLVTKYQASAHKNAEMEDGEEKCNRCHTHQGAVLSAKFHFTGDKTVMDAKVNAPGAIAEPEPIKCNTCHETHKPQDLRVDSNWNPSTTVGAVTTGGDGYDQFRLCTQCHTYTDADGKLAASGTAPTTKFYHNTAWYRIIGTTHYDNPATPAVVEGYNLRTTGPDNSDPCFDCHGHESKTNTRPGRDATIHTDWANSAHGGKLLYAKYSTATANPVTASRTGNPTLYATQGVAQVDAVRAAGSIDNPAANNGAPGWTHYSWDKTLKADGSDADADPDKDRADCQRCHTATGLSNYLSAPTTYNPLNNDFSHLSGWTAMAGSGQNELLYCWGCHSNAGNGTLRNPGAITENYAAINNTTTGTTGTAATVTYPDAKGSNVCMSCHLGREVGQNITNTTDADGDLGFINSHYLAAGGTLFGTTGYEFADRDYVNRSSFKHDKIGSADAPGTGSNGPCVGCHMTTPNSHNFTNVTKNAAGEITAITSTACVTCHSGNYALTPEALTTEEEEYVAALDALKATLASKGIYFHNAHPYFYNGANGTGGAFTNWAGVYGLTEWKNSMGAAFNFNLLEHDPGGYAHNRYYAKRLIWDSIDYIYDGTLNHDVVEAIDAQVTAARLDAAVAAEAKTYLGTARR*