ggKbase home page

S23_scaffold_75_curated_16

Organism: S23_RifCSP_Comamonadaceae_63_35_curated

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(13883..14437)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12552975 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 184.0
  • Bit_score: 345
  • Evalue 3.00e-92
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 184.0
  • Bit_score: 254
  • Evalue 1.50e-65
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 184.0
  • Bit_score: 355
  • Evalue 3.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAGATCCTTTCGCCATCTCGATGACGACGACTGCATCGCCCACGCACAGCGGGGCGACCGCGCAGCGTTCTCGGAGCTGGTGGGGCGCTATCAGGATCGCATCTACCGGTTCCTGGTGCGGCTCACGCGCTCCCAGGACGACGCTCTGGAGCTGACCCAGGAAACCTTCCTCCACGCCTACGAAGCGCTGGAGCGCTGGCGCCCCGAGGCGCGCTTCACGACCTGGCTGTTCCAGATCGCGCGCAACCAGGCCTTTGACTGGCTGCGGCGCGGCAAGCGGGTCGAATTCGTGGCGCTGGAAGACGACGACGAGGCCTCCCTGCCCGACCCGGCCCCCGCGCCCGATGCGGCGCTGGAAACCCGGCAGCGCTTTCATGCGCTGGAGCGGGCACTGGCACGCCTGCCCACCGAGCACCGGGAAATCCTGCTGCTGCGGGAGATCGAAGACATGTCCTATGAAGATATCGCGGCCGTGCTGGACATCGGCCTGGGCACCGTGAAATCACGCATCGCCCGGGCCCGCGCCGGACTGCTGGAAAAAATGCCGCGCTGA
PROTEIN sequence
Length: 185
MRSFRHLDDDDCIAHAQRGDRAAFSELVGRYQDRIYRFLVRLTRSQDDALELTQETFLHAYEALERWRPEARFTTWLFQIARNQAFDWLRRGKRVEFVALEDDDEASLPDPAPAPDAALETRQRFHALERALARLPTEHREILLLREIEDMSYEDIAAVLDIGLGTVKSRIARARAGLLEKMPR*