ggKbase home page

S25_scaffold_11200_curated_1

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: comp(3..416)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 138.0
  • Bit_score: 184
  • Evalue 1.40e-44
Transcriptional regulator, TetR family id=3484300 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 139.0
  • Bit_score: 184
  • Evalue 5.00e-44
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACT17901.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 138.0
  • Bit_score: 184
  • Evalue 7.00e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter sp. M21 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGGATAAATCGGATAAACGAGCGGCCGTTATTCAGGCCGCATTGGAGCTTGTGGCCGAGCATGGATTCCATGGGACGCCGATGGCCATGGTAGCCGAGCGCGCAGGAGTTGCGGCTGGCACCATCTACAGATATTTCGAGAACAAAGATGACCTGATCGAAGAGATATACAGGGAACTGGAAAAACGGCTTACTGCGGCTGTCAGGGAACATTATCCTGAAGGAAAGTCCGTGAGGGAACGGTTCATTCACATCGGCAAGGTGGTAGTGGCATACTGCATCGCCTCGCCAATGGCTTTCCGTTTTCTTGAGCAGTTCCATAATTCCCCCTATGGGGTCGAGCACCGGCGGGAAAAAATGTTTGGCAGGCAGGAAAACGACATATGCACTGGCCTGTTTGAGGAGGGGTTGGAA
PROTEIN sequence
Length: 138
MDKSDKRAAVIQAALELVAEHGFHGTPMAMVAERAGVAAGTIYRYFENKDDLIEEIYRELEKRLTAAVREHYPEGKSVRERFIHIGKVVVAYCIASPMAFRFLEQFHNSPYGVEHRREKMFGRQENDICTGLFEEGLE