ggKbase home page

S25_scaffold_1316_curated_8

Organism: S25_RifleGW_Geobacter_56_8_curated

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2
Location: comp(4755..6002)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 415.0
  • Bit_score: 772
  • Evalue 1.80e-220
Transcription termination factor Rho n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDS7_GEOBB similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 415.0
  • Bit_score: 772
  • Evalue 1.30e-220
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 415.0
  • Bit_score: 772
  • Evalue 3.70e-221
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter bemidjiensis → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAACCTACAAGAACTGAAAAACAAAAAGATTAATGAGTTGACCTCCATTGCCAAGGGGCTCAACATCGAAGGTGCTTCAAGTCTTCGGAAACAGGACCTGATTTTTGCGATTCTTAATGCGCAAACGGAAAAGAATGGCATGATCTTCGGAGAGGGTGTTTTGGAAACCCTTCCGGACGGCTTCGGGTTCCTCAGGGCACCCGACTACAACTACCTGCCGGGGCCGGACGATATTTACGTTTCGCCGAGCCAGATCCGCCGCTTCAACCTGCACACCGGCGACACGGTCTCGGGGCAGATTCGGCCTCCCAAGGAAGGGGAGCGGTACTTCGCCCTCCTGAAGGTTGAGTCGGTGAACCATGAGCCTCCCGAAGTCGCTCGTGACAAGATCCTTTTCGACAACCTGACCCCGCTGTATCCCnnnnnnnnnnnnnnGCTGGAGACAACCCACGACAACATGTCGATGCGCGTCATGGAGCTGATCGACCCGATCGGCAAAGGGCAACGCGGCCTCATCGTCGCGCCGCCGCGGACTGGCAAGACCATGCTGATCCAGAACATAGCCAACTCCATTGCCGAAAATCACCCCGAGGTGTTCCTCATCGTGCTTCTCATTGACGAGCGGCCGGAGGAAGTGACCGACATGCAGCGGTCGGTTCGGGGGGAAGTCATTTCATCGACCTTCGACGAGCCTGCGGCGCGCCACATCCAGGTTGCCGAGATGGTCATCGAAAAGGCGAAGCGGCTCGTGGAGCACAAGCGGGACGTGGTGATCCTGCTGGATTCCATCACCCGTCTTGCCCGCGCCTACAATACCGTAATCCCGCCGTCAGGGAAGATTCTTTCCGGTGGCGTCGACTCCAATGCCCTCCATAAGCCGAAGCGCTTCTTCGGTGCTGCCCGGAACATCGAGGAGGGCGGCTCGTTGACGATCATCGCCACCGCCCTCATCGATACCGGAAGCAAGATGGATGAGGTTATTTTCGAGGAATTCAAGGGAACCGGCAACATGGAGGTTCACCTTGAGCGGAAGCTGGTCGAAAAGCGCACCTTCCCCGCCATCGACCTCAACAAGTCGGGGACCAGGAAAGAGGAGCTGCTCATCGACAAGGCGTCCCTCAACCGGATCTGGATTCTTCGCAAGGTGCTTCATCCGATGAATGTGGTGGACAGTATGGAGTTCCTCATCTCCAAGCTGGAGGGAACGAAGACCAACAAGGAGTTCCTGGACTCCATGAGCAAGTGA
PROTEIN sequence
Length: 416
MNLQELKNKKINELTSIAKGLNIEGASSLRKQDLIFAILNAQTEKNGMIFGEGVLETLPDGFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLHTGDTVSGQIRPPKEGERYFALLKVESVNHEPPEVARDKILFDNLTPLYPXXXXXLETTHDNMSMRVMELIDPIGKGQRGLIVAPPRTGKTMLIQNIANSIAENHPEVFLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAARHIQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPPSGKILSGGVDSNALHKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMEVHLERKLVEKRTFPAIDLNKSGTRKEELLIDKASLNRIWILRKVLHPMNVVDSMEFLISKLEGTKTNKEFLDSMSK*