ggKbase | organisms

Consensus taxonomy: Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: FUEL_CELL_S25_Geobacter_56_8 Manually curated genome
Original version: FUEL_CELL_S25_Geobacter_56_8

Properties

Avg. coverage: 1.00 Longest contig: 10.10 Kbp Bin length: 3.11 Mbp GC content: 53.83 %

Contigs count: 1449 Features count: 3896 rRNAs count: 0 tRNAs count: 30

Genome completeness

megabin RP 39 / 55 MC: 13 BSCG 44 / 51 MC: 17 ASCG 12 / 38 MC: 2

Displaying items 1401-1449 of 1449 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
S25_scaffold_14593_curated Species: Geobacter soli (100%)	1	1257 bp	53.62	1.00	100.00
S25_scaffold_9126_curated Species: Geobacter sulfurreducens (66.67%)	3	1833 bp	62.41	1.00	100.00
S25_scaffold_24544_curated Species: Geobacter uraniireducens (100%)	1	1008 bp	62.10	1.00	100.00
S25_scaffold_9791_curated Species: Geobacter sp. OR-1 (100%)	1	1734 bp	59.23	1.00	100.00
S25_scaffold_8951_curated Species: Geobacter metallireducens (100%)	1	1920 bp	56.88	1.00	100.00
S25_scaffold_14755_curated Species: Geobacter sp. M18 (100%)	1	1368 bp	61.84	1.00	100.00
S25_scaffold_8120_curated Species: Geobacter pickeringii (100%)	1	1803 bp	62.23	1.00	100.00
S25_scaffold_17419_curated Species: Geobacter daltonii (100%)	1	1269 bp	56.58	1.00	100.00
S25_scaffold_7321_curated Species: Geobacter uraniireducens (50%)	2	2670 bp	57.83	1.00	100.00
S25_scaffold_10409_curated Species: Geobacter uraniireducens (66.67%)	3	1554 bp	57.85	1.00	100.00
S25_scaffold_16644_curated Species: Geobacter uraniireducens (100%)	2	1113 bp	59.39	1.00	100.00
S25_scaffold_15738_curated Species: Geobacter sp. M18 (100%)	1	1257 bp	54.26	1.00	100.00
S25_scaffold_6855_curated Species: Geobacter uraniireducens (100%)	2	2138 bp	52.95	1.00	100.05
S25_scaffold_3192_curated Species: Geobacter soli (50%)	2	3639 bp	55.45	1.00	100.08
S25_scaffold_17795_curated Species: Geobacter sp. M18 (50%)	2	1202 bp	56.49	1.00	100.08
S25_scaffold_17598_curated Species: Geobacter pickeringii (50%)	2	1187 bp	54.76	1.00	100.08
S25_scaffold_15412_curated Species: RBG_13_Deltaproteobacteria_49_15_curated (50%)	2	1184 bp	58.70	1.00	100.08
S25_scaffold_9600_curated Species: Geobacter sulfurreducens (66.67%)	3	1837 bp	59.17	1.00	100.11
S25_scaffold_11548_curated Species: Geobacter uraniireducens (100%)	2	1639 bp	59.61	1.00	100.12
S25_scaffold_14667_curated Species: Geobacter sulfurreducens (50%)	2	1339 bp	58.03	1.00	100.15
S25_scaffold_18114_curated Species: Geobacter daltonii (50%)	2	1237 bp	53.11	1.00	100.16
S25_scaffold_18950_curated Species: Geobacter uraniireducens (50%)	2	1201 bp	52.87	1.00	100.17
S25_scaffold_19243_curated Species: GWC2_Geobacteraceae_58_44_curated (50%)	2	1165 bp	61.12	1.00	100.17
S25_scaffold_13404_curated Species: Geobacter daltonii (50%)	2	1434 bp	58.23	1.00	100.21
S25_scaffold_16778_curated Species: Geobacter metallireducens (50%)	2	1299 bp	38.49	1.00	100.23
S25_scaffold_16120_curated Species: Geobacter daltonii (50%)	2	1290 bp	61.24	1.00	100.23
S25_scaffold_16949_curated Species: Geobacter sulfurreducens (50%)	2	1266 bp	56.00	1.00	100.24
S25_scaffold_15267_curated Species: Geobacter uraniireducens (100%)	2	1128 bp	56.74	1.00	100.27
S25_scaffold_20983_curated Species: Geobacter uraniireducens (50%)	2	1074 bp	53.63	1.00	100.28
S25_scaffold_20055_curated Species: Geobacter sulfurreducens (100%)	2	1032 bp	51.94	1.00	100.29
S25_scaffold_23910_curated Species: Geobacter metallireducens (50%)	2	1026 bp	60.72	1.00	100.29
S25_scaffold_20023_curated Species: Geobacter lovleyi (50%)	2	1017 bp	59.69	1.00	100.30
S25_scaffold_19010_curated Species: Geobacter daltonii (100%)	2	1199 bp	56.46	1.00	100.33
S25_scaffold_19135_curated Species: Geobacter soli (50%)	2	1154 bp	56.41	1.00	100.35
S25_scaffold_16619_curated Species: Geobacter uraniireducens (100%)	2	1136 bp	61.36	1.00	100.35
S25_scaffold_3097_curated Species: Geobacter lovleyi (50%)	4	3738 bp	56.23	1.00	100.40
S25_scaffold_7508_curated Species: Geobacter uraniireducens (66.67%)	3	1816 bp	51.21	1.00	100.61
S25_scaffold_18302_curated Genus: Geobacter (66.67%)	3	1180 bp	56.27	1.00	100.68
S25_scaffold_8067_curated Species: Geobacter daltonii (50%)	4	1895 bp	58.63	1.00	100.69
S25_scaffold_19758_curated Genus: Geobacter (66.67%)	3	1138 bp	59.84	1.00	100.70
S25_scaffold_3900_curated Species: Geobacter daltonii (66.67%)	3	3216 bp	59.02	1.00	101.12
S25_scaffold_10629_curated Species: Geobacter uraniireducens (100%)	2	1720 bp	60.70	1.00	101.16
S25_scaffold_12661_curated Species: Geobacter metallireducens (50%)	2	1502 bp	59.12	1.00	101.27
S25_scaffold_21885_curated Genus: Geobacter (66.67%)	3	1018 bp	52.75	1.00	101.67
S25_scaffold_23397_curated Species: Geobacter sp. OR-1 (50%)	2	1041 bp	53.89	1.00	103.75
S25_scaffold_23433_curated Species: Geobacter uraniireducens (50%)	2	1040 bp	50.87	1.00	103.85
S25_scaffold_21310_curated Species: Geobacter daltonii (50%)	2	1080 bp	57.13	1.00	104.44
S25_scaffold_17794_curated Species: Geobacter daltonii (50%)	2	1182 bp	62.27	1.00	104.82
S25_scaffold_17107_curated Species: Geobacter metallireducens (50%)	2	1173 bp	54.82	1.00	111.25

Displaying items 1401-1449 of 1449 in total

S25_RifleGW_Geobacter_56_8_curated

FUEL_CELL_S25_Geobacter_54_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

S25_RifleGW_Geobacter_56_8_curated

FUEL_CELL_S25_Geobacter_54_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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