ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S5_scaffold_12127_curated_1

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: 1..519

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein id=2021969 bin=GWD2_Bacteroidales_45_23 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 305
  • Evalue 1.90e-80
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 177.0
  • Bit_score: 119
  • Evalue 7.00e-25
Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 305
  • Evalue 2.60e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATCGGAAACACGTTTTCCTACAAGGGCCTCGACCTGACAATCTTCTTCTCGGGATCCTACGGAAACCAGGCACTGAACCTCGCCCGGTTCCGCATCGAAGACCCGAGGTCGAACGCCAACATCCTCCGATCGTCGCTCGATTACGCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCTGCATGTCGTCGGGGGCTCCCCCACCATGCCCGCTCTCCAGGAATCGGATGCCAACAACAACTACACGCGGGTGAGCAACCTGCTCATCGAGGACGCGTCGTTCCTGCGACTGCAGAACATATCGGTAGGATACACACTGCCGAAAGGATGGATCAGCAAGATCTACCTGGATAACGTGAGAATATATGCCAACATCCAAAACCTGTACACCTGGACCAAATACAAGGGGTTAGACCCCGAGATTGGCGCCATGTATGGCGATGCGTTGATGAACGGGGTATACTACGTTCGCTATCCTTCACCCCGGATCTATACCGTTTGA
PROTEIN sequence
Length: 173
IGNTFSYKGLDLTIFFSGSYGNQALNLARFRIEDPRSNANILRSSLDYAXXXXXXXXXXXXXXXXLHVVGGSPTMPALQESDANNNYTRVSNLLIEDASFLRLQNISVGYTLPKGWISKIYLDNVRIYANIQNLYTWTKYKGLDPEIGAMYGDALMNGVYYVRYPSPRIYTV*