ggKbase home page

S5_scaffold_6684_curated_2

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: 1297..2457

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8X4P5_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 377.0
  • Bit_score: 423
  • Evalue 1.40e-115
TonB-dependent receptor {ECO:0000313|EMBL:GAO30831.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 378.0
  • Bit_score: 463
  • Evalue 2.20e-127
TonB-linked outer membrane protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 389.0
  • Bit_score: 373
  • Evalue 4.60e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAAAACAGTTATGAGAAGTAGATATTTTATTTTAATGCTGATGCTGTCCATCGGACTGACATCAACAGTAATGGCACAAACTGGAGCAAATTTCATTGTTCAGGGTCGGGTCATGGGATCGGATGGCTACGAGGTAATCGGTGCCAGTGTTGCCGAACTTGACGCCAATAACCGTGTTATTAATGGTACGACCACTGATTTTAGTGGAAACTACGTAATGAGGGTGAGGAGCGCAACAAACCGCTTATCGTTTAGTTATGTGGGCTACAATCGTCAGATAGTGGATATTAATAATCGTCGTACAATTAACGTTACGCTTCAGGAAAGTGTACAAACTATTCGTACAGTAGAGATTACAGCTCAACGCCGCACCTCACAGGGTGGATTCTCTGTCCCAACCCGCGAGTTGAGTACGGCAGTTCAGACAATCGATACCAAAGAGTTTGAAGGGTTGCAGGTGTCATCCATCGATGAAGCCCTTCAGGGACGTATTGCCGGTTTGGATATTGTAGCTAATTCGGGTGACCCCGGTAGTGGTACTTCCATGCGTATTCGTGGGGTTACTTCTATCAATGGTAGCAGCGAACCTTTAATTGTAGTGAACGGTGTGCCTTATGAAGTACAGATTGATCCAAACTTCGACTTTGCCAACTCCAATCAGGAGCAATACGCAAATATGTTAAGTATCAACCCTGACGATATTCTGGAGATTTCTGTACTGAAAGATGCTGCTGCTGCAGCTATCTGGGGTTCGAAAGGTGCCAACGGGGTACTGATGATTACCACTAAGCGTGGTTTGTCAGGACCAACCCGTGTGGACTACTCCTACCGCTATACGTTAACCAAACAACCCGAAGGAATGAATATGTTGAGCGGTGACGACTTTACCATGTTGATGAAACAGGCTTACCTGAATCCTCGTCAGGATGATAATGCTACGATGATTGATGAGTACAACTACGATCCCAATTTCCCTGAATATCAGAATTACAATAACAACACCAATTGGGTACAAGAAATTTCACAATTAGGAAATATTCACGACCATTATCTGACTATCTCTGGTGGGGGCGAACGTGCGCGTTTCCGTGTATCGGGAGGTTACTTCAATCAAAACGGAACAGTAATTGGACAAAATCTGAGTCGTATATCATCACGT
PROTEIN sequence
Length: 387
MKTVMRSRYFILMLMLSIGLTSTVMAQTGANFIVQGRVMGSDGYEVIGASVAELDANNRVINGTTTDFSGNYVMRVRSATNRLSFSYVGYNRQIVDINNRRTINVTLQESVQTIRTVEITAQRRTSQGGFSVPTRELSTAVQTIDTKEFEGLQVSSIDEALQGRIAGLDIVANSGDPGSGTSMRIRGVTSINGSSEPLIVVNGVPYEVQIDPNFDFANSNQEQYANMLSINPDDILEISVLKDAAAAAIWGSKGANGVLMITTKRGLSGPTRVDYSYRYTLTKQPEGMNMLSGDDFTMLMKQAYLNPRQDDNATMIDEYNYDPNFPEYQNYNNNTNWVQEISQLGNIHDHYLTISGGGERARFRVSGGYFNQNGTVIGQNLSRISSR