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S5_scaffold_5433_curated_2

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: 1895..2878

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor {ECO:0000313|EMBL:GAO27636.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 326.0
  • Bit_score: 378
  • Evalue 6.00e-102
SusC/RagA family TonB-linked outer membrane protein id=1809665 bin=GWD2_Bacteroidales_45_23 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 321.0
  • Bit_score: 337
  • Evalue 8.40e-90
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 305.0
  • Bit_score: 320
  • Evalue 5.10e-85

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 984
ATGAACAGAAAAATCACAAAACTAATTTCACTACTTGGTTTACTGCTATTTGTGCAGCTATCCCACGCACAATCTGTTTTAGTAAAAGGTCAGGTTGTGGATATCGAGGGTAATCCTTTACCCGGAGTATCTGTATTAAAAATAGGTTCTACAATTGGTACCATTACTTCATTGGATGGAAAATTTGTTTTTTCCAATCTGAGCGAACAAGATTCGCTTCGCTTTACCTATGTTGGTTACAATACCGAGAGGATTAAAGTTGGACAGCAGACCACAATTAATGTCATCATGAAAGAAACATCCAGCGCCCTGGCCGAAGTGCAGGTAGTGGCCTTTCAAACCCAGAAGAAAAACAGCGTTATTGGATCAATCAATACTGTCAGTCCGGCTGATTTGAAAATTGCACCTACCAACTTAACCAATGCACTTGCAGGGAAAATTGCCGGTATCATTTCTTATCAACGCTCAGGAGAACCGGGACAAGATAATGCTGAGTTTTTTATCCGTGGAGTTACCTCCTTTGGTTATGCCAATGGGCCATTGATTTTGATTGATGGTTTGGAGGTGTCGACCAATGATTTGGCACGCATTGAACCAGATAATATAGCCAGTTTTTCCATAATGAAAGATGCTACTGCAACTGCACTTTATGGCGCACGCGGTGCAAATGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGAAAAGCAAATATCTCAGTTCGCATAGAGAACTCCATTACTTCTCCGACAATGGAAAATCAATTTCTGGATGGTGTTGAATATATGGAGTTGTATAATAAAGCTTTGCGAACCCGTGACCCGGAAGCATTACTGTATTACTCAAAAGATAAGATTGAAGGTACACGTAATGGTTTGAATCCTCAGATCTATCCAAACATCAATTGGTACAATGAATTGTTTCGCTCAACGGTACAAAATCAGAAAGCCAATATGAGCGTTAGTGGTGGTGGCGAAGTA
PROTEIN sequence
Length: 328
MNRKITKLISLLGLLLFVQLSHAQSVLVKGQVVDIEGNPLPGVSVLKIGSTIGTITSLDGKFVFSNLSEQDSLRFTYVGYNTERIKVGQQTTINVIMKETSSALAEVQVVAFQTQKKNSVIGSINTVSPADLKIAPTNLTNALAGKIAGIISYQRSGEPGQDNAEFFIRGVTSFGYANGPLILIDGLEVSTNDLARIEPDNIASFSIMKDATATALYGARGANXXXXXXXXXXXXXKANISVRIENSITSPTMENQFLDGVEYMELYNKALRTRDPEALLYYSKDKIEGTRNGLNPQIYPNINWYNELFRSTVQNQKANMSVSGGGEV