ggKbase home page

S5_scaffold_14626_curated_1

Organism: S5_RifOxy_Bacteroidetes_44_7_curated

partial RP 31 / 55 MC: 5 BSCG 33 / 51 MC: 7 ASCG 9 / 38 MC: 3
Location: 74..610

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 id=2117673 bin=GWD2_Bacteroidales_45_23 species=Bacteroides fluxus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 350
  • Evalue 8.90e-94
  • rbh
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 173.0
  • Bit_score: 150
  • Evalue 2.90e-34
Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 178.0
  • Bit_score: 350
  • Evalue 1.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 537
ATGGATATTGCTGCATATAAAAGAGCCGTCATAGACTTACGACCTACATTACTCCTCGTCGCACAGCGTATCACACGCAATAGCGAAGATGCGGAAGATGTGGTGCAGGAAGTATGCCTGAAGCTCTGGCATCGCTGCCGCACAGACGGTGAGCCGGACAATGTGGAAGCCTACTGTATGACAATGACCAAAAATATCAGCATCGACAAAATCCGGGGAAGGCATCCCGGGGAAGCGGTGGATGAGTTCCTGCATACCGAATCGGAAGCACATCTTCCGGATGAATTGCTGGAAATAAGAGAGGAGCATGCCCTTATTCATCGCATCATCGCTACGCTGCCTCCCCTGCAAAGAAAAATACTCTTGTTGAAGGAGATTGAAGGATATGAAACGGAAGAAATTGTGGCGTTGACGGGTGTTGCCGTCGAAGCGGTACGCAACAATCTTTCCAGAGCCAGAAAACGACTTCGGGAGGTGTATCTCGACACCCGGCAGAAAAGAGAAGCTATGCTTGAAATTTTAGGTAAAAGGGAATAA
PROTEIN sequence
Length: 179
MDIAAYKRAVIDLRPTLLLVAQRITRNSEDAEDVVQEVCLKLWHRCRTDGEPDNVEAYCMTMTKNISIDKIRGRHPGEAVDEFLHTESEAHLPDELLEIREEHALIHRIIATLPPLQRKILLLKEIEGYETEEIVALTGVAVEAVRNNLSRARKRLREVYLDTRQKREAMLEILGKRE*