ggKbase home page

S5_scaffold_3244_curated_3

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: comp(2807..3286)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 150.0
  • Bit_score: 180
  • Evalue 1.20e-42
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003800069 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 158.0
  • Bit_score: 186
  • Evalue 1.50e-44
ribosomal RNA large subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 160.0
  • Bit_score: 172
  • Evalue 4.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCTGATCACCGTCGCCGCCATCGGCAAGCTGAAGGCGGGGCCCGAGCGCGAGCTCATCGATCGTTTCCTTGCGCGCGCCGGCGGTCCCAGCAAGACGATCGGCCTTACCTTCGCCGAGCGGGAACTTCCCGAGAGCCGCGCCGACAACGTCGCCGCGCGCAAGAATCAGGAGGCGGCGGCGCTGGTCGCGTCCGTCGCGCCGGGCGCCGTTCTCGTCGCCCTCGACGAAGGCGGCACGAACCTCGACAGCGCCGGCTTTGCCGCCCGGCTGGCGAAGTGGCGCGACGGCGGCACGCCGGGCGTGGTGTTCGCCGTCGGCGGCGCCGACGGTCACGGCGCCGCACTCCTCGCCAGGGCCGATATGCGCCTCGCTTTTGGCGCAATGACATGGCCCCATCGCCTGGCAAGGGCGATGCTCGCCGAACAGCTTTACCGCGCCGTGACCATCCTTTCGGGCCATCCCTATCATCGCGCCTGA
PROTEIN sequence
Length: 160
MLITVAAIGKLKAGPERELIDRFLARAGGPSKTIGLTFAERELPESRADNVAARKNQEAAALVASVAPGAVLVALDEGGTNLDSAGFAARLAKWRDGGTPGVVFAVGGADGHGAALLARADMRLAFGAMTWPHRLARAMLAEQLYRAVTILSGHPYHRA*