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S5_scaffold_5139_curated_1

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 1..639

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 212.0
  • Bit_score: 247
  • Evalue 1.00e-62
Porphobilinogen deaminase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J251_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 212.0
  • Bit_score: 247
  • Evalue 7.40e-63
hemC; porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 212.0
  • Bit_score: 247
  • Evalue 2.10e-63

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTCATCGTCGCGTGCCTGAAGCGCGGCGACGTGCGCGACGCGTTCGTCTCGCCGGTCGCACGGACGCTCGCCGATCTCCCGCCGGGCGCGATCGTCGGAACCTCGTCGCTCCGGCGGCGGGCGCTCGTCCTGCGCGCGCGCCCCGATCTCGCCGTCGTCGACCTTCGCGGCAACGTCGAGACGCGGCTCCGAAAGATCGCCGAGGGGAAAGCCCACGCGACGTTGCTCGCGGCCGCCGGGCTGATGCGGCTCGGGCTTGCCGATCGCGTCGCGAGCTATCTCGATGCCGAGCTGTGGCTGCCGGCGCCGGGGCAAGGGGCGATCGCCATCGCCGCGCGCGCCGATGACGAGGCGAGACGGGCGCTCGCCGCCGGGACCGACGATCGCGCAACGTCGCTAGCGCTCGCCGCGGAGCGCGCCTTCCTCGCCGAACTTGACGGCTCGTGCCGCACGCCGATCGGTGGCCTCGCCACGCTCGACGGCGACCGCCTCCACTTCCGCGGCACGATCGTGAAGCCCGACGGAAGCGCGGCACACGATGTCTTGCGCGAGGGTCTTGCCAGCGACGGCGAGGCGATCGGGCGCGACGCGGCGGCCGAGCTTGCCCGGCTCGGCGGTCCGGATTTCTTTTCCGGCTAG
PROTEIN sequence
Length: 213
VIVACLKRGDVRDAFVSPVARTLADLPPGAIVGTSSLRRRALVLRARPDLAVVDLRGNVETRLRKIAEGKAHATLLAAAGLMRLGLADRVASYLDAELWLPAPGQGAIAIAARADDEARRALAAGTDDRATSLALAAERAFLAELDGSCRTPIGGLATLDGDRLHFRGTIVKPDGSAAHDVLREGLASDGEAIGRDAAAELARLGGPDFFSG*