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S5_scaffold_3308_curated_2

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: comp(866..1450)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V466_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 184.0
  • Bit_score: 235
  • Evalue 3.50e-59
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI52746.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 184.0
  • Bit_score: 235
  • Evalue 4.90e-59
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 177.0
  • Bit_score: 214
  • Evalue 2.40e-53

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGTTGAAGCGGCGGGCTTAGACCAACAGGAGACCCCGCGTCTGCGCGAACTCGACTGGTCGATTCTCATGGCGCGGGCTCAGGATGGTGATCGCGAGGCCTATCACCGGCTGCTGACCGACATCAGCCCCTATCTCCGTATGCTCGTGGCCAGGCGGATTAGGGACCGTACCGACGTGGAGGACGCAGTTCAGGACATCCTGCTGACGGTGCATGCAATCAGGCACACCTACGATCCAGCCCGTCCGTTCGCGCCCTGGTTGGTCACGATCGCAAAGCGAAGAATTATTGATCGCCTGCGTATTCATGGCCGCAACCGCCGTCGCGAGGTCATGCTCGATATCGTCCACGAGGGCGTTGCCGATCCTCAGGCTGACGTCGTTCATGACCAACGCCATCTACAAGCTGCTGTCGATGACTTGCCGCCTGCTCAACAGCAAGCGCTGCGGCTGGTCAAACTACAGGAGATGTCCCTGAAGGAGGCCTCAGAAGCGAGCGGCACGTCCGTTGCTGCGCTGAAGGTCAACATCCACCGGGCCCTCAAGAACCTTCAGAAGATGCTTTCCGATCGGATCATGCCATGA
PROTEIN sequence
Length: 195
VVEAAGLDQQETPRLRELDWSILMARAQDGDREAYHRLLTDISPYLRMLVARRIRDRTDVEDAVQDILLTVHAIRHTYDPARPFAPWLVTIAKRRIIDRLRIHGRNRRREVMLDIVHEGVADPQADVVHDQRHLQAAVDDLPPAQQQALRLVKLQEMSLKEASEASGTSVAALKVNIHRALKNLQKMLSDRIMP*