ggKbase home page

S5_scaffold_2116_curated_7

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: comp(6406..6663)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 78.0
  • Bit_score: 101
  • Evalue 4.80e-19
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363EA78 similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 85.0
  • Bit_score: 106
  • Evalue 8.20e-21
Mfd, transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 85.0
  • Bit_score: 99
  • Evalue 3.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
TGCCGCCAAGCCAACGTCGAGAAGGTCGATGTCGGGCCGAAGGGTGCGGTCATTGCTTTCCGCGGCACTACGTTCGCCAATCCGGCCGGGCTGATCGCCTGGATTGCCGACCAGCGCTCGGAGGCGCGGATTCGGCCCGACCAGACCGTCGTCCTGATGCGCGACTGGGCCGATCTGGGCGGCCGCCTCAAGGGCATTGCCGGCATTCTCGGCGTGCTTTCGCGGCTCGCCGCCGAGGGTGAGAAGGCGGCTGCCTAA
PROTEIN sequence
Length: 86
CRQANVEKVDVGPKGAVIAFRGTTFANPAGLIAWIADQRSEARIRPDQTVVLMRDWADLGGRLKGIAGILGVLSRLAAEGEKAAA*