ggKbase home page

S5_scaffold_2833_curated_4

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: comp(2964..3980)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 319.0
  • Bit_score: 429
  • Evalue 2.40e-117
tRNA-dihydrouridine synthase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NSU3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 319.0
  • Bit_score: 429
  • Evalue 1.70e-117
  • rbh
TRNA-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 310.0
  • Bit_score: 397
  • Evalue 2.60e-108
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Labrenzia aggregata → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGCAGACCGATCCGGCCATTGCCGACCTGTCGCGCCCGCTTGCCGTCGGGCCGGTGAGCCTGCCGAACCGCGTGTTTCTCGCGCCGATGTCCGGGGTTTCCGACCGGCCGTTCCGCGAGATCGCCGCTGCGTTCGGCGCCGGGCTGGTGGTCTCCGAGATGGTGGCGGGCGAAATGCTGGCGCGCGGGGACGCGCAAGCGCTGATGCGCGCCGAGCGGGCCGGCGACGGTCCGCACGTGGTTCAACTCGCCGGGCGCGAGGCGCGGTGGATGGCCGAGGGCGCGCGCGCCGCGACCGACGCCGGCGCCGACATCATCGACATCAACATGGGCTGCCCGGCGAAGAAAGTGACCGGCGGCTATTCCGGGTCGGCGCTGATGCGCGACCTCGATCACGCGTTGACGCTGATCGAGGCGACCGTCGGCGCGACGCATCTGCCGGTGACGCTGAAGATGCGCCTCGGCTGGGACGACGCCGCGATCAATGCTCCCGAACTTGCCCGCCGCGCTGAAGCCGCCGGTGTGCGGATGATCACTGTCCACGGACGCACCCGCTGCCAGTTCTATTCCGGCAACGCGGACTGGTCCGCGATCCGCGCCGTGAAGGATGCGATCACGATTCCTCTGATCGCCAACGGCGACCTGGTATCGCCCGCCGACCTCGGGCGCATGCTGGCACTATCGGGCGCCGACGGCGTGATGATTGGGCGCGGCGCCTACGGGCGGCCGTGGTTGCCAGGGCACATCGCAACATACGCGGCGACCGGCGCGATGCCCGAACCGCCGGCCGGCGCGGCGCTGTTCGAGCTTGTGGCCCGCCACTACGAGGCGATGCTGGCGCACTACGGCGAACGCGTCGGCCTGAAGGCGGCGCGGAAACACCTCGGCTGGTATCTCGACCACGCCGGCGCGCCGCCGGAGTTGCGGCAGGCTGTCTTCACGGCGACTTCACCGCGCGAAGTCTTGCGCCTCATCGCCGCGGCGCTCGCCGGCGTTCCGGAAGCGAGGGCGGCATGA
PROTEIN sequence
Length: 339
MQTDPAIADLSRPLAVGPVSLPNRVFLAPMSGVSDRPFREIAAAFGAGLVVSEMVAGEMLARGDAQALMRAERAGDGPHVVQLAGREARWMAEGARAATDAGADIIDINMGCPAKKVTGGYSGSALMRDLDHALTLIEATVGATHLPVTLKMRLGWDDAAINAPELARRAEAAGVRMITVHGRTRCQFYSGNADWSAIRAVKDAITIPLIANGDLVSPADLGRMLALSGADGVMIGRGAYGRPWLPGHIATYAATGAMPEPPAGAALFELVARHYEAMLAHYGERVGLKAARKHLGWYLDHAGAPPELRQAVFTATSPREVLRLIAAALAGVPEARAA*