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S5_scaffold_3660_curated_4

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 2866..3447

Top 3 Functional Annotations

Value Algorithm Source
Putative RpoE6 RNA polymerase sigma factor n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSC4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 172.0
  • Bit_score: 171
  • Evalue 6.10e-40
Sigma-24 subunit of RNA polymerase, ECF subfamily {ECO:0000313|EMBL:KEC81737.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 163.0
  • Bit_score: 175
  • Evalue 6.00e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 163.0
  • Bit_score: 170
  • Evalue 3.90e-40

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCGGGCGTTGTAGCGCACGATGGATCGGGAAACCGCCGCGGGCCGAAGGTGGACATGAGCGTCGACATCCGGCCCCACATGATTGCCCTGTTGCCGCGGCTGCGGGCCTTCGCCCATGCGCTGGCGCGGTCGGGCGATGCGGCCGACGATCTCGTGCAGGCGACCTGTGAGAAGGCACTCGGCGCCGTCGACTCGTGGACGCCGGGAAGTCGCCTCGACAGCTGGATGTTCCGCATCATGCAGAATCACTGGATCGACCTGAAACGCCGCACGCGGCCGCAGACGGGGCTCGACGGACCCGACGGCCTGCGGCTGGTTGCCGAGGACGGCCGTCGTGTCGCCGAGGCGCGCCTGACGCTCGGTACGGTACGCGATCTGATTGAGGAGATGTCGGAGGACCAACGCACGGTGCTGGTGCTCGTCTGCGTCGAGGAACTCAGCTATCGCGAGGCGGCCGAGGTACTCGACATCCCGATCGGAACCGTGATGAGCCGGCTGGCGCGCGCCCGCAAGACCATCGCCGACGCGATGGGTGCCGACAGGACGGACGAAAGCCGGGCCTCTGGAGCGATGCCATGA
PROTEIN sequence
Length: 194
MAGVVAHDGSGNRRGPKVDMSVDIRPHMIALLPRLRAFAHALARSGDAADDLVQATCEKALGAVDSWTPGSRLDSWMFRIMQNHWIDLKRRTRPQTGLDGPDGLRLVAEDGRRVAEARLTLGTVRDLIEEMSEDQRTVLVLVCVEELSYREAAEVLDIPIGTVMSRLARARKTIADAMGADRTDESRASGAMP*