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S5_scaffold_3638_curated_2

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 541..1080

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhizobium sp. AP16 RepID=J2KYE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 155.0
  • Bit_score: 224
  • Evalue 4.30e-56
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJK80131.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 155.0
  • Bit_score: 224
  • Evalue 6.10e-56
RNA polymerase sigma factor protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 176.0
  • Bit_score: 223
  • Evalue 2.70e-56

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCCGATCACATTCACGATCCCGTGACGGAGGGCATCGCCGGCGAGCTGAGGCGGCTGTGGCGCTACGGGCTGGTGCTGTCGAGCAACCGCGATACGGCGGAGGAACTCGTCCAGGCGACCTGCGTCCGGGCGCTGGAACGGGCCCACCAGTTCCAGGCCGGTACGCGCCTCGACCGCTGGCTGATCTCGATCCTCCATTCGATCTGGCTGAACGAGGTCCGGTCGCGGAAAGTCAGGCAGGGGCAGGGGCTGGTCGATGCCGACGCGGTGCTGGTCTTCGACGGGCTCCGGGCCACGGAAGCGAATATTATGGCCGGTCAGGTGTTGAGGGAGGTACAGGGGCTGCCGGAAGCCCAGCGCGAAACCGTATATCTGGTCTACGTCGAAGGCATGACGTATCGCGAGGCCGCCGAGGTTCTCGCCGTGCCGATCGGTACGGTCATGTCGCGGCTGTCGGCGGCGCGCGGCCGGCTGGCCGGTCTGAAAGTCGAGTCACCGGAAGAGAGTAGCGGAAGGCATGGCAGATCAAGTCGATAG
PROTEIN sequence
Length: 180
MADHIHDPVTEGIAGELRRLWRYGLVLSSNRDTAEELVQATCVRALERAHQFQAGTRLDRWLISILHSIWLNEVRSRKVRQGQGLVDADAVLVFDGLRATEANIMAGQVLREVQGLPEAQRETVYLVYVEGMTYREAAEVLAVPIGTVMSRLSAARGRLAGLKVESPEESSGRHGRSSR*