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S5_scaffold_6079_curated_2

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 612..1349

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 245.0
  • Bit_score: 347
  • Evalue 8.50e-93
tRNA pseudouridine synthase A n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLU2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 245.0
  • Bit_score: 347
  • Evalue 6.10e-93
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 245.0
  • Bit_score: 334
  • Evalue 2.60e-89
  • rbh

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Taxonomy

Lutibaculum baratangense → Lutibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACAAGCTCACCATCGAATACGACGGCGGCCCGTTCGTCGGCTGGCAGCGGCAGGAGAACGGCCGCTCGGTGCAGCAGGCGATCGAGGAGGCTGTCGCTGCGTTTTCCGGCGAGGCGGTTGTGGTGAAAGGCGCCGGGCGGACCGATTCCGGCGTCCATGCGCTCGGCCAGGTGGCGCACATCGATCTCGTCCGCGAATTTGACGACGACACCGTGCGTGACGCGATCAATGCCAAGCTGAAGCCGGAGCCGGTTGCGATCCTCGTGGCCGAACGGGCCGCCGACGATTTCGACGCGCGCTTCTCGGCGGTGAAGCGGCACTATCTTTACCGGATCCTGAACCGGCGGGCGCAGCCCGCCGTCGACGCCGGCCGCGTCTGGTGGGTGACCTCGCCGCTCGACGCCGAGGCCATGCACATGGCCGCGCAGGCGCTCGTCGGCAACCACGACTTCACGACCTTTCGCTCGTCGGAATGCCAGGCGAAGTCGCCGGTGAAGACGCTGGACCGCCTCGACGTATCGCGGGCGGGCGACGAGGTGACGGTCAGCGCCTCGGCGCGCTCGTTCCTGCACAATCAGGTGCGCTCGATGGTCGGCGCGCTCCGCAAGGTCGGCGACGGCAAATGGCCGTTCGCCGCCGTCGGCGAGGCGCTGGAAGCGAAGGACCGCGCCCGCGCCGGGCCTGTGGCGCCGCCGGAGGGGCTCTATCTGGTGAGGGTGGATTACTAG
PROTEIN sequence
Length: 246
MPRYKLTIEYDGGPFVGWQRQENGRSVQQAIEEAVAAFSGEAVVVKGAGRTDSGVHALGQVAHIDLVREFDDDTVRDAINAKLKPEPVAILVAERAADDFDARFSAVKRHYLYRILNRRAQPAVDAGRVWWVTSPLDAEAMHMAAQALVGNHDFTTFRSSECQAKSPVKTLDRLDVSRAGDEVTVSASARSFLHNQVRSMVGALRKVGDGKWPFAAVGEALEAKDRARAGPVAPPEGLYLVRVDY*