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S5_scaffold_5327_curated_2

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 1283..2977

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Kaistia granuli RepID=UPI00036360B8 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 568.0
  • Bit_score: 833
  • Evalue 6.40e-239
  • rbh
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 565.0
  • Bit_score: 800
  • Evalue 1.70e-229
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 565.0
  • Bit_score: 800
  • Evalue 8.50e-229

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGGCAACCAAGGTCAAGGAAACCGAAGAGGCGCCCGAGGCGGAGACCCCGGACAAGGACAGCCCGCTCCTCGATCTTTCCGACGCCGCCGTCAAGAAGATGATCAAGTCCGCCAAGAAGCGCGGCTTCGTCACCTACGACGAACTGAACTCCGTCATGCCCTCGCAGGAAGTCGGCTCCGAGCAGATCGAGGATGTGCTGTCGATGCTTTCCGAGATGGGCATCAACGTCATCGAGACGGAAGAAGCCGACGAGGCCGAGGCCGACGACGAGGAGGAGAAGGAGGAGGGGACCGAGGTCGCCGAGCGTCCGTCGACCGCCGTCGCCAAGGCGACCACCGCCAAGGAGCCGACCGACCGCACCGACGATCCGGTCCGCATGTATCTCCGCGAGATGGGCTCGGTCGAGCTATTGTCGCGCGAGGGCGAGATCGCCATCGCCAAGCGGATCGAGGCCGGCCGCGAGACGATGATCGCGGGCTTGTGCGAATCCCCGCTCACCTTCCAGGCGATCATCATCTGGCGCGACGAGCTCGCCGCCGGCAAGATTCTCCTCCGCGACATCATCGATCTGGAAGCCACCTACGCCGGGCCCGACGCCAAGAACGCGCCGATCCAGGTGCACACGCCGCCGGAGGGCGGCCACCAGCGCGGCAATCCCTACATCAAGGTGACGCCGCCGAACGCGCCGCCGATCGCGCCGGCCGAGGACGACGACGAGGTCGCCGCCGAGCGCGCGCGGATCGCGGCGCAGGAAGAAGAAGACGACGACGAGTTCGAGAACGCCATGTCGCTCGCCGCCATGGAGGCCGAGCTGAAACCCGCGGTGGTCGAAACCTTCGACACCGTCGCCGCCGAATACAAGAAGCTCCGCCGCCTGCAGGATCAGGACGTCGAGCTGAAGCTCGGCAACAAGAAGCTGACGCCGTCGCAGGAGCGCCGCTACAAGAAACTGAAGGACGATATCGTCAAGGCGGTGAAGTCGCTGTCGCTCAACCAGCACCGCATCGATTCCCTCGTCGAGCAGCTCTACGACATCAACAAGCGCCTGGTCTCGATGGAGGGCCGGCTCCTTCGCCTCGCCGAGAGCCACAAGGTCAGCCGCGAATCCTTCATCAAGGAATACCAGGGCGCCGAGTTGGACCCCAACTGGCTCCGCCGCATCTCGAATCTTTCCGCCAAGGGCTGGAAGGAGTTCGTGCAGAAGGAGAAGGAGCGGATCAAGGATCTCCGCCGCGACATCCAGAGCCTCGCCACCGAGACGGGCCTCGAGATCACCGAATACCGCCGCATCGTCCACATGGTGCAGAAGGGCGAGCGCGAGGCGCGCCAGGCGAAGAAGGAGATGGTCGAGGCCAACCTCCGCCTGGTCATCTCGATCGCCAAGAAATACACCAACCGCGGCCTGCAGTTCCTCGATCTCATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTATCGCCGCGGCTACAAGTTCTCCACCTACGCCACGTGGTGGATCAGGCAGGCGATCACCCGCTCAATCGCCGATCAGGCGCGCACCATCCGCATTCCGGTCCACATGATCGAGACGATCAACAAGATCGTCCGCACCAGCCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACGCCGGAGGAGCTTGCCGAGAAGCTCGCGATGCCGCTCGAAAAAGTCCGC
PROTEIN sequence
Length: 565
MATKVKETEEAPEAETPDKDSPLLDLSDAAVKKMIKSAKKRGFVTYDELNSVMPSQEVGSEQIEDVLSMLSEMGINVIETEEADEAEADDEEEKEEGTEVAERPSTAVAKATTAKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWRDELAAGKILLRDIIDLEATYAGPDAKNAPIQVHTPPEGGHQRGNPYIKVTPPNAPPIAPAEDDDEVAAERARIAAQEEEDDDEFENAMSLAAMEAELKPAVVETFDTVAAEYKKLRRLQDQDVELKLGNKKLTPSQERRYKKLKDDIVKAVKSLSLNQHRIDSLVEQLYDINKRLVSMEGRLLRLAESHKVSRESFIKEYQGAELDPNWLRRISNLSAKGWKEFVQKEKERIKDLRRDIQSLATETGLEITEYRRIVHMVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVR