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S5_scaffold_7240_curated_1

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 3..1850

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 537.0
  • Bit_score: 721
  • Evalue 5.50e-205
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C8D86 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 550.0
  • Bit_score: 755
  • Evalue 3.20e-215
  • rbh
rne; ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 516.0
  • Bit_score: 719
  • Evalue 5.50e-205
  • rbh

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Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1848
GGCGAGACCATTACGGAGGCCGGCTCTGCCGACGCGTCGGCGGAGGCCGCTGCAGAGAACGACGGGAATGAAGCGGCGGAGGCGGATGCTTCCGACCACGGCGACGATTCCGATGGTGGCGAGTACCTGGATCGCGGCGATCACGACGACAACGGCGCCGAGGCGGCAACGATGGAGGCCGCCGAGCCGGCCGAGGAAGGCGAAGTCATCAGCGACGACCAGGTCGAATCGGTCGGCGCCGAGGACGCCATGGAGGAGGTGCCGGAGCGCCGCAAGACGCGGGTGCGCCAGTACAAGATCCAGGAAGTCATCAAGCGCCGCCAGGTGCTGCTGGTGCAGGTCGTCAAGGAGGAGCGCGGCAACAAGGGCGCGGCGCTGACCACCTACCTGTCGCTTGCCGGCCGTTATTCGGTGCTCATGCCGAACACCGCGCGCGGCGGCGGCATCAGCCGCAAGATCACGTCGATCACCGACCGCAAGCGGCTGAAGCAGGTGGTGTCCGACCTTGAGGTGCCGCCCGGCATGGGCGTGATCCTCAGGACCGCCGGCGCCAGCCGGACCCGCGCCGAGGTCAAGCGCGACTTCGAGTACCTGATGCGGCTCTGGGAGAACGTGCGCGAGCTGACGCTGAAGTCGTCGGCGCCGATGCTGGTTTACGAGGAAGGCTCGCTGATCAAACGCTCGATCCGCGACCTCTACAACAAGGACATCGACGAGGTTCAGATCGCCGGCGACGACGCCTATCGCGAGGCCAAGGACTTCATGCGCATGCTCATGCCGAGCCATGCCAAGAACGTGCAGCCCTACAAGGAAGGGCAGCCGCTGTTCGCGCGCTTCGGCATCGAGGCGCAGCTCGACGCGATGTTCTCGCCGCAGGTGACGCTTCGCTCCGGCGGCTACATCGTCATCAACCAGACCGAGGCGCTGGTCTCGATCGACGTGAACTCGGGCCGCTCGACGCGCGAGCACAACATCGAGGACACGGCGCTCCAGACCAACCTCGAGGCGGCCGAGGAAGTCGCCCGGCAACTCCGGCTTCGCGATCTCGCCGGCCTCATTGTCATCGACTTCATCGACATGGAGGAGAAGCGCAACAACCGGTCGGTCGAGCGCAAGATGAAGGATGCGCTGAAAAACGACCGGGCGCGCATCCAGGTCGGCCGCATCTCGCATTTCGGCCTTCTCGAGATGAGCCGCCAGCGCATCCGCACCGGCGTGCTCGAATCGACGACCAGCGTCTGTCCGACCTGCCAGGGCACCGGCCACGTCCGCGCCCCGTCGTCGGTGGCGTTGCATGTGCTGCGCTCGCTGGAAGACTCGCTCCTCAAGGGCGCCACCCATCACCTGACCATCCGCACGCGCACCAACGTGGCCCTCTACATCCTCAACCAGAAGCGCGCGCACCTCTCCGAAATCGAGCAGCGCTTCGGCCTGACGATCACCGTCTCGGCCGACGAGACCATCGCCAACGGCGCGCACTTCGTCATCGAGCGGGGCGAGCCGATCGAGCCGCGCGCGCTTGTCGCCCCGTTGGTGACGCCGGCGTCGGTGGCGCTGGCGCCGGAACTGGAAGACGAGGTCGAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGGAATCCGTCGAGGCGGCGAGCGCCGGTGCGGAGCCGCGCGTGGATCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCGGGCAGCAGCAGGCCATGCCGGTGGACCGCTTCCTGCAGGACCGCTACTGGGAGCCGGCGCAGTACTGGCACTGGCAGGCCCAGGCGATGGAGCAGATGCAGCGCGCCGGCACGGTGGAGGTGGGGCCGGCCACCGGTGTGTCACCGGCCGAGTGA
PROTEIN sequence
Length: 616
GETITEAGSADASAEAAAENDGNEAAEADASDHGDDSDGGEYLDRGDHDDNGAEAATMEAAEPAEEGEVISDDQVESVGAEDAMEEVPERRKTRVRQYKIQEVIKRRQVLLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITSITDRKRLKQVVSDLEVPPGMGVILRTAGASRTRAEVKRDFEYLMRLWENVRELTLKSSAPMLVYEEGSLIKRSIRDLYNKDIDEVQIAGDDAYREAKDFMRMLMPSHAKNVQPYKEGQPLFARFGIEAQLDAMFSPQVTLRSGGYIVINQTEALVSIDVNSGRSTREHNIEDTALQTNLEAAEEVARQLRLRDLAGLIVIDFIDMEEKRNNRSVERKMKDALKNDRARIQVGRISHFGLLEMSRQRIRTGVLESTTSVCPTCQGTGHVRAPSSVALHVLRSLEDSLLKGATHHLTIRTRTNVALYILNQKRAHLSEIEQRFGLTITVSADETIANGAHFVIERGEPIEPRALVAPLVTPASVALAPELEDEVEXXXXXXXXXXESVEAASAGAEPRVDXXXXXXXXXXXGQQQAMPVDRFLQDRYWEPAQYWHWQAQAMEQMQRAGTVEVGPATGVSPAE*