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S5_Rhizobiales_66_15_curated

FUEL_CELL_S5_Rhizobiales_65_1
In projects: FUEL_CELL_S5  |  fuel_cell_curated

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: FUEL_CELL_S5_Rhizobiales-rel_66_15 Manually curated genome
Original version: FUEL_CELL_S5_Rhizobiales-rel_66_15

Properties

Avg. coverage: 1.00 Longest contig: 26.10 Kbp Bin length: 2.53 Mbp GC content: 64.77 %
Contigs count: 756 Features count: 3158 rRNAs count: 0 tRNAs count: 25

Genome completeness

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Displaying items 301-350 of 756 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S5_scaffold_3121_curated
Species: Mesorhizobium sp. LNHC220B00 (50%)
4 4676 bp 67.92 1.00 67.11
S5_scaffold_6255_curated
Order: Rhizobiales (50%)
4 2488 bp 63.63 1.00 93.45
S5_scaffold_6760_curated
Class: Alphaproteobacteria (75%)
4 2400 bp 67.25 1.00 89.25
S5_scaffold_4662_curated
Species: Starkeya novella (75%)
4 3315 bp 67.48 1.00 99.00
S5_scaffold_5025_curated
Species: Polymorphum gilvum (50%)
4 2799 bp 69.38 1.00 93.25
S5_scaffold_4191_curated
Species: Polymorphum gilvum (50%)
4 3765 bp 67.30 1.00 93.55
S5_scaffold_3997_curated
Class: Alphaproteobacteria (50%)
4 3906 bp 65.16 1.00 95.31
S5_scaffold_6079_curated
Class: Alphaproteobacteria (75%)
4 2694 bp 69.41 1.00 100.33
S5_scaffold_5670_curated
Order: Rhizobiales (50%)
4 2842 bp 66.82 1.00 91.73
S5_scaffold_4940_curated
Species: Xanthobacter autotrophicus (50%)
4 3301 bp 62.04 1.00 63.25
S5_scaffold_4265_curated
Order: Rhizobiales (50%)
4 3698 bp 67.20 1.00 96.38
S5_scaffold_6617_curated
Order: Rhizobiales (50%)
4 2425 bp 65.53 1.00 83.51
S5_scaffold_5632_curated
Order: Rhizobiales (50%)
4 2708 bp 63.77 1.00 86.08
S5_scaffold_4938_curated
Class: Alphaproteobacteria (50%)
4 3240 bp 63.73 1.00 82.96
S5_scaffold_8345_curated
Order: Rhizobiales (100%)
4 2043 bp 68.38 1.00 92.22
S5_scaffold_4564_curated
Order: Rhizobiales (75%)
4 3501 bp 63.01 1.00 57.75
S5_scaffold_6245_curated
Order: Rhizobiales (50%)
4 2545 bp 65.97 1.00 85.34
S5_scaffold_2986_curated
Order: Rhizobiales (50%)
4 6173 bp 66.45 1.00 91.17
S5_scaffold_6331_curated
Order: Rhizobiales (50%)
4 2757 bp 70.26 1.00 91.73
S5_scaffold_3295_curated
Order: Rhizobiales (50%)
4 5405 bp 67.92 1.00 96.80
S5_scaffold_5417_curated
Order: Rhizobiales (50%)
4 2971 bp 66.21 1.00 84.72
S5_scaffold_3233_curated
Order: Rhizobiales (50%)
4 4861 bp 63.05 1.00 75.91
S5_scaffold_5919_curated
Class: Alphaproteobacteria (50%)
4 2783 bp 64.71 1.00 72.44
S5_scaffold_2887_curated
Class: Alphaproteobacteria (75%)
4 5001 bp 64.29 1.00 75.52
S5_scaffold_2495_curated
Species: Shinella sp. DD12 (50%)
4 5829 bp 66.79 1.00 82.91
S5_scaffold_5770_curated
Order: Rhizobiales (50%)
4 2845 bp 69.35 1.00 98.28
S5_scaffold_14087_curated
Domain: Bacteria (50%)
4 1282 bp 65.91 1.00 95.71
S5_scaffold_15214_curated
Order: Rhizobiales (75%)
4 2454 bp 63.69 1.00 77.38
S5_scaffold_4309_curated
Order: Rhizobiales (50%)
4 3593 bp 63.96 1.00 93.10
S5_scaffold_3665_curated
Species: Polymorphum gilvum (50%)
4 4245 bp 59.01 1.00 68.98
S5_scaffold_11751_curated
Order: Rhizobiales (100%)
4 1475 bp 68.75 1.00 98.03
S5_scaffold_8422_curated
Order: Rhizobiales (50%)
4 1839 bp 63.89 1.00 78.47
S5_scaffold_5961_curated
Order: Rhizobiales (50%)
4 2759 bp 64.30 1.00 93.29
S5_scaffold_6486_curated
Order: Rhizobiales (50%)
4 2446 bp 61.28 1.00 76.04
S5_scaffold_6884_curated
Order: Rhizobiales (50%)
4 4198 bp 63.27 1.00 91.40
S5_scaffold_5908_curated
Order: Rhodobacterales (50%)
4 2763 bp 67.57 1.00 88.06
S5_scaffold_6355_curated
Genus: Mesorhizobium (50%)
4 3588 bp 64.66 1.00 92.39
S5_scaffold_5691_curated
Genus: Mesorhizobium (75%)
4 2861 bp 63.16 1.00 84.83
S5_scaffold_6159_curated
Order: Rhizobiales (50%)
4 2635 bp 54.50 1.00 58.52
S5_scaffold_3173_curated
Order: Rhizobiales (75%)
4 4707 bp 63.35 1.00 76.99
S5_scaffold_5758_curated
Order: Rhizobiales (75%)
4 2660 bp 65.56 1.00 82.11
S5_scaffold_3672_curated
Genus: Mesorhizobium (50%)
4 4261 bp 60.76 1.00 76.32
S5_scaffold_3674_curated
Order: Rhizobiales (75%)
4 4191 bp 65.40 1.00 87.76
S5_scaffold_7850_curated
Order: Rhizobiales (50%)
4 2025 bp 66.62 1.00 84.30
S5_scaffold_5266_curated
Order: Rhizobiales (50%)
4 3079 bp 61.25 1.00 85.94
S5_scaffold_5149_curated
Genus: Rhizobium (50%)
4 3170 bp 63.60 1.00 67.85
S5_scaffold_6657_curated
Class: Alphaproteobacteria (50%)
4 2366 bp 65.00 1.00 100.42
S5_scaffold_6183_curated
Class: Alphaproteobacteria (50%)
4 2678 bp 62.43 1.00 65.65
S5_scaffold_6650_curated
Order: Rhizobiales (50%)
4 2427 bp 67.20 1.00 95.55
S5_scaffold_3826_curated
Species: Rhodopseudomonas palustris (50%)
4 4059 bp 66.79 1.00 92.61
Displaying items 301-350 of 756 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.