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S7_scaffold_18_curated_9

Organism: S7_Holophaga_63_20_curated

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 7443..9062

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 491.0
  • Bit_score: 547
  • Evalue 2.10e-152
Ribonuclease Y n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5Q6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 539.0
  • Bit_score: 859
  • Evalue 1.80e-246
  • rbh
phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 539.0
  • Bit_score: 541
  • Evalue 1.80e-151
  • rbh

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Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAATGCACTCGATTTGATTCTATTGATCATTGCCGTCGCCGCCTGCGCCGGATTCCTTCTTCAGACGAAGAAGGCCCAGCAGGCGGTGGTGGACGTCTCCAAGGCCACGGCGAAGGCCGAGGAGGACATCAAGGCCCAGCGGGAAAGAATCCTGCAGGATGCCGAGAAGGAGGCCGCTCGGACCCTGGATCGAGGCCAGAAGGAGGCCGACGCGCTCCGGAAGGAATCCGAGCTCAAGGCCAAGGAACAATCCATCCAGGCCCGCCAGGAGGCCGAGACGCTCGTGAATGAGCGCATGGCCAATCTGGAGAAGCAGAGCCAGCGTCTCCAACAGAAGGAAGAAAGCTTCGACAAGAAGCTGGCCCAGGTGGAGCAGAAGACCAAGGAATTGGAACTCAAGACCGAGAAGACCCGGGAGGAGCAAGAGAAGCTCGACGCCCTCAGAGCCGAGGCCAAGAAGCTGGTGGAGGATCAGGCCCGCAAGCTGGAAGAACTCTCGGGCCTGACCCGGGAAGAAGCCAAGGCCGAGATCATCGGCCAGCTCGAGTACTCCGCCAAGATGGACTCCGCCAAGATGGTGCGGCGCATCGAGGAAGAGGCCCAGGAAGAAGCCCAGAAGAAGGCCCGGTGGACCATCGCCACGGCCATCCAGCGAGTGGCCTCGGACGTGATCGCCGAAACCGCCGTCACTTCCGTGCAGCTGCCCTCAGATGACCTGAAGGGCCGCATCATCGGACGTGAGGGCCGCAATATCCGCGCCCTGGAGAAGGCCACGGGCTGCGATCTCATCGTGGACGACACCCCCGAGACCATCGTGGTGTCCAGCTTCGACCCCATCCGGCGCGAAGTGGCGCGCCAGGCCATCCTCAAGCTGTTGGCGGACGGACGCATCCACCCCGCCCGCATCGAGGAGGTGGTTGAGAAGACCAAGGTGGACATGGATCAGCACCTGAAGGAACTGGGCGAGACCACCTCCATCGCCATGGGTTTCCCCGACGTGCATCCCAAGCTGCACAAATTGATTGGTCGCCTGAACTACCGCACCAGCTACGGCCAGAACGTGCTGGAGCACACCAAGGAAGTGGCCCACATCGCCGAGTACATGGCCACGGAAATGGGCGCGGATGCCCGGTTGGCGCGGCGTGCGGGACTCTTTCACGACATCGGTAAGGCCATCGACCGCGAGGTGGAAGGCACCCACATCGAGATCGGCATGGAGCTGCTCAAGCGCTTCGGAGAGAAGGCCGATGTGATCCATGCCATGAGTTGCCATCACGGTGACCACGAGCCCAAGACCGTCGAGGCCATGCTCATCACCGCCGCCGACGCCCTCTCCGCCGCTCGTCCCGGTGCCCGCCGCGAGATGCTGGAGACCTACGTCAAGCGCCTCGAGCAGCTCGAGACCATTGCCAACTCCTACAAGGGCGTGCAGAAGAGCTACGCCATGCAGGCGGGCCGCGAGATCCGCATCCTGGTGGATGCCGGTCAGGTCAACGATGATCAGGCCTACTGGATCGCCAAGGATGTCTCCAAGCGCGTGGAGGCCGAGATGCAGTATCCCGGCCAGATCAAGGTGACAGTCATGCGGGAGACCCGGGCCGTGGAGTACGCCCGATAG
PROTEIN sequence
Length: 540
MNALDLILLIIAVAACAGFLLQTKKAQQAVVDVSKATAKAEEDIKAQRERILQDAEKEAARTLDRGQKEADALRKESELKAKEQSIQARQEAETLVNERMANLEKQSQRLQQKEESFDKKLAQVEQKTKELELKTEKTREEQEKLDALRAEAKKLVEDQARKLEELSGLTREEAKAEIIGQLEYSAKMDSAKMVRRIEEEAQEEAQKKARWTIATAIQRVASDVIAETAVTSVQLPSDDLKGRIIGREGRNIRALEKATGCDLIVDDTPETIVVSSFDPIRREVARQAILKLLADGRIHPARIEEVVEKTKVDMDQHLKELGETTSIAMGFPDVHPKLHKLIGRLNYRTSYGQNVLEHTKEVAHIAEYMATEMGADARLARRAGLFHDIGKAIDREVEGTHIEIGMELLKRFGEKADVIHAMSCHHGDHEPKTVEAMLITAADALSAARPGARREMLETYVKRLEQLETIANSYKGVQKSYAMQAGREIRILVDAGQVNDDQAYWIAKDVSKRVEAEMQYPGQIKVTVMRETRAVEYAR*