ggKbase home page

OR_07242016_12_scaffold_202_15

Organism: OR_07242016_12_Halothiobacillus_neapolitanus_53_168

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: comp(15008..17446)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 796.0
  • Bit_score: 1354
  • Evalue 0.0
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 796.0
  • Bit_score: 1354
  • Evalue 0.0
Ribonuclease R Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXP1_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 796.0
  • Bit_score: 1354
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2439
ATGACCCAAGAGACGGTAAACGATCCGAACGCAGTCCAAGAGGCTGAAAAGTACGATAATCCAGTAGCAAGCCGCGAATTTATTTTGCAATTGCTCTCTGAGCACGATGGGCCGTTAACGCTCAATCGAATGATTAGCCACCTTTTGTATGATGGTGATGATGAACGAATCGAAGGCCTGAGCCGTCGTCTGCGCGCGATGGAGCGCGATGGTCAGGTGATTCGTAATCGCCGAGGCGGTTATGTGCCCGTCACGCATGCCGAGCTTGTGCGGGGGCGGGTGCTGGGCCATCGGGATGGGTTTGGTTTTCTGGTGCCCGATGAAGGGGGCGACGATGTGTTTCTCTCGCCCCGCGTTATGCGGGCATTGCTCAATGGCGACCGAGCCGTGGTGCAGGTTACCGGGCTTGATCGTCGTGGCCGTCGCGAGGGTAACCTCGTTGAAGTTATCGAACGGGCGAATGCCGAGATTGTGGGGCGAATTGTGCTGGAGGCCGGTATTGCCTTTGTGGTGCCCGATCACGCCCGCATGACGCAAGATGTGCTCATCCCGATGACCGACTTGCACGGAGCGCGCGATGGCCAAATCGTGCGCGTTGCCTTGGTCGAGCAGCCCACATTGCGGCACAAGCCGGTGGGCAAAGTCGTTGAAGTGATGGGCGACCATATGTCCCCCGGCATGGAAATTGATGTGGCCATTAACTCGCACGGCATCCCGCATGAATGGCCAGAGGCCGTTTTATCGGCCATTGATGGCTTGCACCCGCAGGTGAGTGATGCCGATAAATCGGGCCGAGTTGATTTGCGGCACTTGCCGCTGGTCACCATTGATGGCGCCGATTCTAAAGATTTTGATGATGCGGTGTATTGTCATCCCGTGCCAGAAGGCTTCCGGCTTTTAGTGGCCATTGCCGATGTGAGCCATTATGTACGCGTCGGTTCGCCGCTTGATCGGGAAGGCTTTAATCGAGCGACCTCGGTTTATTTTCCTGGGCGCGTTGTACCGATGTTGCCTGAGATTTTATCCAACGGATTGTGTTCGCTCAATCCGGCCGTGGATCGCTTGTGTCTCTGTGCCGATATGGTCATTAACCCGGATGGCAAACTGGTTAAATTCCGCTTTTTTGAGGGCGTAATGCGCTCTGCCGCGCGGCTAACCTACGATTTGGTTGCTCAAATTCTGGTCGAGCAAGCCCCCGATGCGCGGGCAGAGCACGCGGCCCTACTTGAGCCGCTCGAATCGTTGTATTCAGTCTACCGTGTGTTGCGCGCCGAGCGTGATCGGCGGGGTGCTATTGATTTTGAAACGGTGGAAACCCGCATCGTATTTGGCGAGGGGCGGAAAATTGAGGCCATCGTGCCGTATGAGCGTAACGATGCGCACAAAATCATTGAAGAGTGCATGATTGCCGCAAACGTCGCGGCAGGCCGGTTTGTTTCTGATCAAAAAATTCCGGCGCTGTATCGGGTGCACGATCGCCCCACGGCAGAAAAAATAACCGATTTGCGTAGCATGCTGGCCGAAAAAGGCTTATCGCTCGGCGGTGGTGATGAGCCAAAACCGCGTGACTTCAATACCCTGCTCAGTGGAATACAAGGGCGGCCGGATTTTCTCACCATTCAAACCATGATTTTGCGTTCATTGCGCCAAGCGGTGTATTCACCGAATAACTTGGGGCATTTTGGTCTTGCGCACGAGTTTTATGCGCACTTCACCTCGCCGATTCGCCGCTACCCCGATTTAATGGTGCATCGGGCGATTCGGCATGTTTTGCGCACCGGAGGCGCCGAGAAATTTCCGTATAGCCATGATGAAGTGGTCATTATTGGTGAGCATTGCTCCAACAATGAGCGCCGTGCAGATGAAGCGACCCGCGATGCCACCGATTGGCTCAAATGCGAGTTTATGCTGGATAAAGTGGGCGAGGTGTTTGCTGGGCGCGTTTCCTCTGTCTTAGGTTTTGGTTTATTTATCGAGCTCAAAGACTTCTTCGTGGAAGGCTTGTTGCATATTACGGCGCTCACTAAAGACTATTACCATTTTGATCCTGCCACGCTGTCTTTGCGCGGCGAGCGCTCAGGGCGGGTGTATGCGCTCAACGATGAAATTCGCGTTCGTGTGGCGCGCGTGGATTTAGATGAGCGGAAAATCGATTTTGTTCTGCCCGATGATGCCGATGCAATGAATGATGCCGACTTTGAAGATGAGCCGGATCAAGAGCAAGATGGCGATGATGCGGATAAAAAGAAACGCAAACCTCGCCGCCGGCGCCGCAAAAAGCCAACGGATGAGTCGGGCGCGTCTGCCGATGGTTCGGCTGAACCAGCGTTGGCGGGCGAGCCTTTAGCCACCCAGCCCACCCCGTCACCCGCGCCCGTGGCGACAACATCCGAATCGGTTGCCGAGCGCACGCCTCCGCGCGACGACGAGGCGCGCTAA
PROTEIN sequence
Length: 813
MTQETVNDPNAVQEAEKYDNPVASREFILQLLSEHDGPLTLNRMISHLLYDGDDERIEGLSRRLRAMERDGQVIRNRRGGYVPVTHAELVRGRVLGHRDGFGFLVPDEGGDDVFLSPRVMRALLNGDRAVVQVTGLDRRGRREGNLVEVIERANAEIVGRIVLEAGIAFVVPDHARMTQDVLIPMTDLHGARDGQIVRVALVEQPTLRHKPVGKVVEVMGDHMSPGMEIDVAINSHGIPHEWPEAVLSAIDGLHPQVSDADKSGRVDLRHLPLVTIDGADSKDFDDAVYCHPVPEGFRLLVAIADVSHYVRVGSPLDREGFNRATSVYFPGRVVPMLPEILSNGLCSLNPAVDRLCLCADMVINPDGKLVKFRFFEGVMRSAARLTYDLVAQILVEQAPDARAEHAALLEPLESLYSVYRVLRAERDRRGAIDFETVETRIVFGEGRKIEAIVPYERNDAHKIIEECMIAANVAAGRFVSDQKIPALYRVHDRPTAEKITDLRSMLAEKGLSLGGGDEPKPRDFNTLLSGIQGRPDFLTIQTMILRSLRQAVYSPNNLGHFGLAHEFYAHFTSPIRRYPDLMVHRAIRHVLRTGGAEKFPYSHDEVVIIGEHCSNNERRADEATRDATDWLKCEFMLDKVGEVFAGRVSSVLGFGLFIELKDFFVEGLLHITALTKDYYHFDPATLSLRGERSGRVYALNDEIRVRVARVDLDERKIDFVLPDDADAMNDADFEDEPDQEQDGDDADKKKRKPRRRRRKKPTDESGASADGSAEPALAGEPLATQPTPSPAPVATTSESVAERTPPRDDEAR*