ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

OR_07242016_12_scaffold_186_24

Organism: OR_07242016_12_Halothiobacillus_neapolitanus_53_168

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: 18566..18988

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0H9_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 185
  • Evalue 2.30e-44
RNA-binding S4 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 185
  • Evalue 6.50e-45
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACX96202.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 185
  • Evalue 3.20e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGAGTAAATCTGCTGCGATAAGCACACCGCCGCCCACAGAACAGCGCCTTGATACGTGGCTGTGGGCGGCACGATTCTTCAAAACCCGTTCGTTAGCATCTGCGGCCATTGAAGGCGGAAAAATTCGGCTTAACGATCAAGCCTGCAAAAAAGCGGGCAAAGGGGTTCGCATCGGTGATCGGCTTGACATTGAACGCGGCGATACCCGCTGGGTGATTACGGTTAAGGGCTTATTAAAGCAGCGCGGTTCTGCCACCATCGCGCAAACCTTGTATGCCGAATCGCCCGAAGCACTGGCTGAGCGCCTGCGCCAAGCGCAAGAGCAACATCAAATACGCCAGCAAAACCCTACGCCGAGCAAACCCGATCAACACACCCGCATTTTGCTGCGGGCGATACGCCGAGAATCGGTTGGGTCTTGA
PROTEIN sequence
Length: 141
MSKSAAISTPPPTEQRLDTWLWAARFFKTRSLASAAIEGGKIRLNDQACKKAGKGVRIGDRLDIERGDTRWVITVKGLLKQRGSATIAQTLYAESPEALAERLRQAQEQHQIRQQNPTPSKPDQHTRILLRAIRRESVGS*