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OR_07102018_0_5m_scaffold_824_5

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: 2026..3210

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000255|HAMAP-Rule:MF_01012}; EC=2.1.1.189 {ECO:0000255|HAMAP-Rule:MF_01012};; 23S rRNA(m5U747)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01012}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 389.0
  • Bit_score: 475
  • Evalue 4.40e-131
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=RLMC_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 389.0
  • Bit_score: 475
  • Evalue 3.10e-131
23S rRNA (uracil-5-)-methyltransferase RumB similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 389.0
  • Bit_score: 475
  • Evalue 8.80e-132

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCAATGCGCTTATTTTAATGCCGCCGTTTGCCGCTCTTGTGTTTGGTTGCCGGTGCCCTATGCCACCCAGCTCGCACAAAAAGCGCAGAGCGCCGCCACGCAATTAGCCGCCTTCACCGCGCTTGTGTGGCTGCCGCCCGTACCCAGCGCCGAGCAGGGTTTTCGTAATAAAGCCAAAATGGTGGTGTCGGGTTCATCGCGCGCGCCCAAGCTGGGTATTTTAGATGCGCGAGGTCAGGGGGTTGATTTAACGCAATGCGGCTTGTACCCCAAGGCACTATCGGCGGCATTTGAGCCGATAAAACGCATGATTACGCGGTTAGCGCTTACTCCCTATGAGATTGCAGCGCGCCGAGGCGAGTTGAAGTACGTGCTGATTACCCATTCGGCGGCAGATAATAGTTTGATGGTGCGATTGGTGTTGCGCTCAACCGCCCGAGTTAGCGCTATTCAAGCCGATTGGCTGAATTTGATTGCCGATTTGCCTGCCCTTGCCGTGCTGTCGGTTAACATTCAGCCGGTGCATCAGGCTATTTTGGAAGGCGAGACGGAGCTTATTTTGAGCCCGCGTGAAACCTTAACCATGGTTTTGAATGGCTTGCCTTTTTATCTGCGCCCGCGCAGTTTTTTTCAAACCAACACCGCAGTGGCTGCCCAATTGTATGCCACCGCCCGTGATTGGGTGGCTGAACTCGCGCCGCGCGATCTATGGGATTTATTTTGCGGGGTGGGTGGTTTTGCGCTGCATTGCGCGCCTTATGTATCGGGTGAGGTGACGGGGATTGAGGTAAGCGCTGAGGCGATTGCCAGCGCCCAGCAATCGGCCGCAGAGTTGGGCCTAACCCAGGCGCGGTTTCGCGCGCTTACCGCCGATGATTTTGTGGCCACGGTCGCAAAATTGCCCGCCTTGGTGGTGGTTAATCCTCCGCGCCGAGGTTTGGGGACAGAACTTTGTCGCTTTCTTCATGACGCGGCGGCGGATCAATCCCGCCCCCTGCGCTGGATGATCTATTCCAGTTGCAACCCCGAATCTTTAGCGCGCGATTTAGCCGCCATGCCAAGTTTTACGCCAATCCGCGCGCAGCTGTTTGATTTGTTTCCCCACACGGCGCACAGCGAAGTGCTGGTTTTGCTCGAGCGCAAGAGAACGGGCAAGGGCATCCCTCAGGGGCGGCCGGATTAA
PROTEIN sequence
Length: 395
MQCAYFNAAVCRSCVWLPVPYATQLAQKAQSAATQLAAFTALVWLPPVPSAEQGFRNKAKMVVSGSSRAPKLGILDARGQGVDLTQCGLYPKALSAAFEPIKRMITRLALTPYEIAARRGELKYVLITHSAADNSLMVRLVLRSTARVSAIQADWLNLIADLPALAVLSVNIQPVHQAILEGETELILSPRETLTMVLNGLPFYLRPRSFFQTNTAVAAQLYATARDWVAELAPRDLWDLFCGVGGFALHCAPYVSGEVTGIEVSAEAIASAQQSAAELGLTQARFRALTADDFVATVAKLPALVVVNPPRRGLGTELCRFLHDAAADQSRPLRWMIYSSCNPESLARDLAAMPSFTPIRAQLFDLFPHTAHSEVLVLLERKRTGKGIPQGRPD*