ggKbase home page

OR_07102018_0_5m_scaffold_701_2

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(567..1055)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 2.20e-73
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 1.10e-72
Ribonuclease H n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1S8_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 145.0
  • Bit_score: 280
  • Evalue 7.90e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCCCAAAATCGCCCTTTAGATGATTTAAACCCCATAGCCGAGGCCAGCCCAGCGCGCACGGTTGTGCATATCTGGACCGATGGTGCCTGCAAAGGCAACCCCGGCATCGGCGGTTGGGGCGCGTTATTGCGTTATGGCGGGCACGAAAAAGAACTCTGTGGCGGCGAGGCGCACACCACCAATAATCGCATGGAATTATTAGCCGCCATTAGTGCCCTTGAAACCTTAAAGCGCCCGTGCATCGTGCATTTAACCACCGATTCCCAATATGTGCGCCAAGGCATGCTGGAATGGTTAGCCAATTGGCGCAAACGCAATTGGCGGCGGGCGGATGGTCAGCCGGTGAAAAATGCAGATTTATGGGTGCGATTGGATGAGGCCGCCAAGCGGCATCAAATGCACTGGCATTGGATTAAAGGCCACGCGGGGCATATTGAAAACGAGCGCGCCGATCAGCTGGCGAATCGCGGCATTCTAACGTGTTGA
PROTEIN sequence
Length: 163
MSQNRPLDDLNPIAEASPARTVVHIWTDGACKGNPGIGGWGALLRYGGHEKELCGGEAHTTNNRMELLAAISALETLKRPCIVHLTTDSQYVRQGMLEWLANWRKRNWRRADGQPVKNADLWVRLDEAAKRHQMHWHWIKGHAGHIENERADQLANRGILTC*