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OR_07102018_0_5m_scaffold_394_28

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(26655..26981)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 108.0
  • Bit_score: 194
  • Evalue 5.30e-47
DNA-directed RNA polymerase subunit omega n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVX3_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 108.0
  • Bit_score: 194
  • Evalue 3.80e-47
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 108.0
  • Bit_score: 194
  • Evalue 1.10e-47

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGCGCGTGTCACCGTAGAAGATTGTCTTGTAAAGATTCCGAACCGCTTTGAGCTGGTTTTAATGGCCGCCCGCCGTGCCCGCCAAATTGAACAGGGCGCCGAGCCCTTGGTGCCGATGGGCAAAGAAAAGCCCGTGGTCATCGCGTTGCGCGAAATTGGCGAGGGCAAAATTGATTCGGCTCGCATTGAAGAAATTCAATCCAACATGGTTATTTTGCGCTCGCAAATTTCTGAAGCCGAAATTCGGGCAGAGCTTGCGCAATTTGCCGACGAGGATGAAGGCGGCAGTGTTCGTCGCCCGGCGACCACGAGCGACGAGGGCTAA
PROTEIN sequence
Length: 109
MARVTVEDCLVKIPNRFELVLMAARRARQIEQGAEPLVPMGKEKPVVIALREIGEGKIDSARIEEIQSNMVILRSQISEAEIRAELAQFADEDEGGSVRRPATTSDEG*