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OR_07102018_0_5m_scaffold_1482_2

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(221..1048)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 282.0
  • Bit_score: 346
  • Evalue 2.80e-92
Shikimate dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYM2_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 282.0
  • Bit_score: 346
  • Evalue 2.00e-92
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 282.0
  • Bit_score: 346
  • Evalue 5.60e-93

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GTGTTAACGAACGCATTAAACCACCCCCATAGCCGCTATGGGGTTATTGGCAACCCGATTGGCCACAGTCGCTCGCACACGGCCATTTTGGCGCCCCTAGACGGGTTTGAGGCCACCGTAGCCGCCTTTCGGCAAGAAGGCGGGCGCGGCCTGAATGTGACCGTGCCCTTCAAGGCGCAAGCCTTTGCCCTCTGCCACACGCTCAGTGAACGGGCCGCGCGGGCGGGCGCGGTGAACACCCTGATTTTTCCGCCTGATCCCCAAGGTAATATCCAGGGTAATATCCAGGGTGAAATCCAAGGCGATAACACCGATGGGGTCGGTTTGCTGCAAGATTTTGCGTTTCAGGGCATAAAACTCTTGGGGGAAAAAGTTTTGCTCCTTGGGGCCGGCGGGGCTAGTCGAGGGGTTTTAGCGCCGCTCTTGGCCGAACAACCCGCCCAATTACGCATCGCTAATCGGCGCGAAAAAACCGCCCAAGCACTCATCGCTGATTTTGCCGATTTAGCCGATAAAACCGCATTCACCGCCTGCGCGCTTGATGCCATCCCCGCCGAACCCTTTGATGTGATTATTAATGCCACCTCAGCGGGTTTGAGTGATACCGAACTCCCCCTGCCCGAGGCGCTGATTCACGCCGATACCGTGGTGTATGACATGGCCTATGGCCATGGGCCCACCGTGTTTATGCGCTGGGGCCAAGCGCGGGGCGCGCAGGCGTTTGATGGTTTGGGCATGTTGGTTGAGCAAGCCGCGCAGAGTTTTTATCTGTGGCACGGGATTTACCCCGATACCCGCCCCGTGCGAGATTTATTGCGTGCGACTTAA
PROTEIN sequence
Length: 276
VLTNALNHPHSRYGVIGNPIGHSRSHTAILAPLDGFEATVAAFRQEGGRGLNVTVPFKAQAFALCHTLSERAARAGAVNTLIFPPDPQGNIQGNIQGEIQGDNTDGVGLLQDFAFQGIKLLGEKVLLLGAGGASRGVLAPLLAEQPAQLRIANRREKTAQALIADFADLADKTAFTACALDAIPAEPFDVIINATSAGLSDTELPLPEALIHADTVVYDMAYGHGPTVFMRWGQARGAQAFDGLGMLVEQAAQSFYLWHGIYPDTRPVRDLLRAT*