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OR_07102018_0_5m_scaffold_14371_1

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: 3..764

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoS n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L243_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 250.0
  • Bit_score: 442
  • Evalue 2.40e-121
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 250.0
  • Bit_score: 442
  • Evalue 6.90e-122
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 250.0
  • Bit_score: 442
  • Evalue 3.40e-121

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
AGTTATTCCCGGCGGGCGCAAGCGGGTGATGAATCGGCGCGGCAAAAAATGATTGTGTGTAATTTGCGCTTGGTCATTAAAATTGCCCGCCGCTATATGAATCGTGGTCTTGATTTGCTCGATTTAATCGAAGAGGGCAATTTAGGCTTGATGCGTGCGGTCGAAAAATTTGATCCCGAGCGCGGGTTTAGATTTTCAACCTATGCCACGTGGTGGATTCGCCAAACCATTGAGCGCGGTTTAATGAACCAATCGCGTACGGTGCGTTTGCCGGTGCATGTAGTTAAAGAAGTGCACAGTTTTAATCGTGCCGCGCGTAAAATTGCGCAAAATCAAAATGCTGAGGTCACAGCCGAGCAAATTGCCGATCACCTCGATCGCCCCGTGGATGACGTGCTGAAAGTGATGGCCTATAACGAGCGTCAATCCTCGTTCGATAGCCCGCTCAAAGGGGATGGTGAGTTCTCGTTATTGGATTTAATCCCCGATGAGGCTTGCAATCAGCCCGATGAGATTTTGCAAGATAACGGGGTTAATACTTTGTTAAATAAGCTTTTATCCCAGCTTGAATCCAAGCAGCGTGAAGTGCTGATGCGGCGCTACGGCTTGCGCGGCTATGAAACGCAAACCCTCGAAGAAGTGGGGGCATTGCTCGGGGTAACGCGCGAGCGTGTGCGGCAAATTCAGCTTGAAGCCGTGCGCAAGCTCAAGCAATTAGCCAAAAATGCTGGGGTGACTGCCGATACCATTTTCGCGCAGTAA
PROTEIN sequence
Length: 254
SYSRRAQAGDESARQKMIVCNLRLVIKIARRYMNRGLDLLDLIEEGNLGLMRAVEKFDPERGFRFSTYATWWIRQTIERGLMNQSRTVRLPVHVVKEVHSFNRAARKIAQNQNAEVTAEQIADHLDRPVDDVLKVMAYNERQSSFDSPLKGDGEFSLLDLIPDEACNQPDEILQDNGVNTLLNKLLSQLESKQREVLMRRYGLRGYETQTLEEVGALLGVTRERVRQIQLEAVRKLKQLAKNAGVTADTIFAQ*