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OR_07102018_0_5m_scaffold_19414_1

Organism: OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 2 ASCG 10 / 38 MC: 3
Location: comp(2..778)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 259.0
  • Bit_score: 366
  • Evalue 4.90e-99
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 259.0
  • Bit_score: 366
  • Evalue 2.40e-98
tRNA pseudouridine synthase A n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZX4_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 259.0
  • Bit_score: 366
  • Evalue 1.70e-98

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACTCGCATCGCGCTCGCTGTTGAATATGATGGCTCACGGTATCACGGATGGCAGCGCCAGCAGGATGTTGATTCAGTCCAAGCGCGGCTTGAAGCGGCGCTTTCACAGGTGGCCAATGCCCCCATTGATGTCGTGTGTGCGGGGCGAACGGATGCCGGTGTTCATGCCACTAATCAAATTGTGCATTTTGATTCAAATGCCCTGCGCCCTGATCAGGCTTGGTTATTGGGGGGTACCCACGCATTACCATCCGATGTCAGTATTATTTGGGCGCGCGCGGTGGCACCCGATTTTCACGCGCGTTTTAGTGCAATAGCCCGCAGTTATCGGTATGTGATTTTAAACCGCCAAACTCGGTCAGCGGTTCATCACGGGCATGTCACCTGGTGGCGAGAGCGCCTTAATGCGCACTGGATGCATGAAGCGGGCCAGTTTTTGTTAGGTGAACATGATTTCAGTAGCTTTCGCGCCAAAGGCTGCCAAGCCCACAGCCCCATTCGCACGGTGGCGTCCTTTCGCGTGCAGCGCCAAGGTGATTTTATTTATATCGACATTACCGCTAATGCGTTTTTGCATCACATGGTGCGCAATATTGTCGGCACGCTGCTGCCCATTGGGGCGGGGATTCATTCCATTGCATCGTTCTCTGCGCTTTTGGCGAAAAAAGAACGCGCCCTAGCGGGCATCACCGCGCCGGCGGCCGGCTTGTATCTGGTTAATGTGGTTTATCCCGATCACTTTGCTATTGCGCAGCCGCAAGCTATTCCGGGTTTT
PROTEIN sequence
Length: 259
MTRIALAVEYDGSRYHGWQRQQDVDSVQARLEAALSQVANAPIDVVCAGRTDAGVHATNQIVHFDSNALRPDQAWLLGGTHALPSDVSIIWARAVAPDFHARFSAIARSYRYVILNRQTRSAVHHGHVTWWRERLNAHWMHEAGQFLLGEHDFSSFRAKGCQAHSPIRTVASFRVQRQGDFIYIDITANAFLHHMVRNIVGTLLPIGAGIHSIASFSALLAKKERALAGITAPAAGLYLVNVVYPDHFAIAQPQAIPGF