ggKbase home page

OR_09272017_19_scaffold_42

Search features with annotation key words

Displaying items 61-82 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_09272017_19_scaffold_42_61
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76580..77125
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas tolaasii RepID=UPI0002D46969
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KJJ96707.1}; TaxID=1619948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
OR_09272017_19_scaffold_42_62
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77191..78669
DNA (1479bp) protein (493aa)
Phosphomannomutase {ECO:0000313|EMBL:GAO54640.1}; EC=5.4.2.8 {ECO:0000313|EMBL:GAO54640.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phosphomannomutase (EC:5.4.2.8)
phosphomannomutase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F1D9
OR_09272017_19_scaffold_42_63
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78972..79277
DNA (306bp) protein (102aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ3_HALNC
DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ACX95666.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_64
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79274..79630
DNA (357bp) protein (119aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
mRNA interferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ4_HALNC
MazF family transcriptional regulator
OR_09272017_19_scaffold_42_65
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80162..80404
DNA (243bp) protein (81aa)
Antitoxin n=1 Tax=Thauera sp. 63 RepID=N6Y4E0_9RHOO
hypothetical protein
Tax=GWA2_Gallionellales_60_142_curated
OR_09272017_19_scaffold_42_66
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80407..80841
DNA (435bp) protein (145aa)
Ribonuclease VapC n=1 Tax=Thauera sp. 63 RepID=N6X726_9RHOO
predicted nucleic acid-binding protein, contains PIN domain
Tax=GWA2_Gallionellales_60_142_curated
OR_09272017_19_scaffold_42_67
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81055..82227
DNA (1173bp) protein (391aa)
Putative capsule polysaccharide export protein bexD n=1 Tax=Ralstonia solanacearum RepID=D8NWS4_RALSL
putative capsule polysaccharide export protein bexD
Putative capsule polysaccharide export protein bexD {ECO:0000313|EMBL:CBJ51879.2}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
OR_09272017_19_scaffold_42_68
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82234..83394
DNA (1161bp) protein (387aa)
Glycosyltransferase family protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0T5_9RHOO
glycosyltransferase family protein
Glycosyltransferase family protein {ECO:0000313|EMBL:BAL22582.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
OR_09272017_19_scaffold_42_69
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83378..84466
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI00036D6937
capsule polysaccharide biosynthesis protein
Capsule polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAP88385.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
OR_09272017_19_scaffold_42_70
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84463..85716
DNA (1254bp) protein (418aa)
Capsular polysaccharide export protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W6F9_BORPA
wcbO; capsular polysaccharide export protein
Capsular polysaccharide export protein {ECO:0000313|EMBL:CAE38246.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
OR_09272017_19_scaffold_42_71
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85703..86485
DNA (783bp) protein (261aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:EXI68573.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EXI68573.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hetN; short-chain dehydrogenase/reductase (EC:1.3.1.-)
short-chain dehydrogenase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624DB5
OR_09272017_19_scaffold_42_72
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86485..87990
DNA (1506bp) protein (502aa)
Capsular polysaccharide biosynthesis/export transmembrane n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JBG4_ALCFA
Capsular polysaccharide biosynthesis/export transmembrane {ECO:0000313|EMBL:EJC61309.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
rkpI; capsular polysaccharide biosynthesis/export transmembrane
OR_09272017_19_scaffold_42_73
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88022..89461
DNA (1440bp) protein (480aa)
Cytochrome P450 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0U1_HALNC
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ACX96314.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_74
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89454..90362
DNA (909bp) protein (303aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0U0_HALNC
lipid A biosynthesis acyltransferase
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:ACX96313.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_75
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90471..90875)
DNA (405bp) protein (135aa)
Ribonuclease VapC n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NXJ7_AROAE
virulence associated protein VapC
Tax=CG_Beta_01
OR_09272017_19_scaffold_42_76
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91273..92301)
DNA (1029bp) protein (343aa)
cobalt transporter n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624A87
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDQ08860.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
OR_09272017_19_scaffold_42_77
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92410..93144)
DNA (735bp) protein (245aa)
Thioredoxin n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1K5_HALNC
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACX96578.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_09272017_19_scaffold_42_78
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93466..94614
DNA (1149bp) protein (383aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
acetylornithine deacetylase (EC:3.5.1.16)
Acetylornithine deacetylase / acetylornithine deacetylase ArgE n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0ABR8_ALKEH
OR_09272017_19_scaffold_42_79
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94591..94968)
DNA (378bp) protein (126aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Lipid-A-disaccharide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L037_HALNC
OR_09272017_19_scaffold_42_80
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94968..95696)
DNA (729bp) protein (243aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Lipid-A-disaccharide synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L037_HALNC
OR_09272017_19_scaffold_42_81
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95732..96232
DNA (501bp) protein (167aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ribonuclease HII n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L036_HALNC
OR_09272017_19_scaffold_42_82
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96236..97090)
DNA (855bp) protein (285aa)
glutamate--tRNA ligase (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Glutamate--tRNA ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZN2_HALNC
Displaying items 61-82 of 82 in total

View Taxonomy