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OR_09272017_19_scaffold_71_54

Organism: OR_09272017_19_Halothiobacillus_neapolitanus_54_831

near complete RP 50 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 56477..56743

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVK5_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 153
  • Evalue 6.00e-35
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 153
  • Evalue 1.70e-35
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 153
  • Evalue 8.50e-35

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCAAAAGCCCAGTCACTCCAAGAACCTTATTTAAACGCCCTGCGGCGCGAGCATGTGCCGGTATCGATCTACCTGCGCAATGGCATTAAATTGCAAGGGCAAATTGATTCATTCGATAATTTTGTGGTGTTGCTCAAAAATAATGTCAGCCAATTGGTGTACAAACATGCCATCAGCACCATCGTGCCCACGCGTGAAATTCAATTTGATTTTGACGACGAAGGCTTCGCCAAAAATGAGCCATCGGGAGATGAAGGCCTTTAA
PROTEIN sequence
Length: 89
MAKAQSLQEPYLNALRREHVPVSIYLRNGIKLQGQIDSFDNFVVLLKNNVSQLVYKHAISTIVPTREIQFDFDDEGFAKNEPSGDEGL*