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OR_06102018_0_5m_0_1um_scaffold_1636_5

Organism: OR_06102018_0_5m_0_1um_Halothiobacillus_54_31

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(4811..5467)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT04_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 191.0
  • Bit_score: 215
  • Evalue 4.20e-53
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EIJ34497.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 191.0
  • Bit_score: 215
  • Evalue 5.90e-53
membrane protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 202.0
  • Bit_score: 202
  • Evalue 8.00e-50

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCTGGATGAGTATGAATCTCTGCCTAAGCGCTTTAATCACACGTACCAAAAAAAATACACCTGGACTGGACGCTTGTCTCTCGCTGCATCCATTTTAGTATCTGTTTCTATGGGAATTTTGATTGGGTGGCTGCTCCGCGATACGCAGACTCAGCACAACAGCGCAGAAGTCATTACTGCATTCAACGCAACAACTTATGCAATAACACGCAACGCTGCTGCGTTAAATCTAGCTCGCCGTGCTGCCATCGCCCACGCAGTTTATAGCCCTGACAAGCGACATCCTGTCGAGATTGATGCAAATAATGAAGATAAATTGGTTACTTGGCTATCTAATCGTTTGGGCGTTGACCTAACCCCCCCGAAGTTGAATGCACTCGGGTACGACCTAATTGGCGGGCGGTTACTACCCGGTAATGATGGGCCGGTCGCTCAGTTCATGTATCACGATGCGGCAGGAAAGAGAGTGACGCTTTACATAACCCATGAAACGAAAGACAGTAAAACCACTGCATTTCAATTCGTACAAGAAGGGCCAATAGGAGTATTTTTTTGGATAGATCGCGGATTTGGATATGCCATTTCCGCCGGTGCTGATCAGCAAGAACTAAGACGTATCGCGGTATCGGTATATGATCAACTCCCAATTAAATAA
PROTEIN sequence
Length: 219
MLDEYESLPKRFNHTYQKKYTWTGRLSLAASILVSVSMGILIGWLLRDTQTQHNSAEVITAFNATTYAITRNAAALNLARRAAIAHAVYSPDKRHPVEIDANNEDKLVTWLSNRLGVDLTPPKLNALGYDLIGGRLLPGNDGPVAQFMYHDAAGKRVTLYITHETKDSKTTAFQFVQEGPIGVFFWIDRGFGYAISAGADQQELRRIAVSVYDQLPIK*